Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F14
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   7.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.6  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 301 EAWRFLIAHAVGISVRCRSFA-PSWAVCTNPPFQPDRCALSGNYRLESNPVRHDLSPLAA 477
           +A  F I+   GI+ +   ++ P+W+    P F+P +  +S +      P      P  A
Sbjct: 25  QALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEPEME--RPKGA 82

Query: 478 ATGNRISRA 504
           + G R   A
Sbjct: 83  SNGKRARTA 91


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 301 EAWRFLIAHAVGISVRCRSFA-PSWAVCTNPPFQPDRCALSGNYRLESNPVRHDLSPLAA 477
           +A  F I+   GI+ +   ++ P+W+    P F+P +  +S +      P      P  A
Sbjct: 45  QALGFKISDNSGINSQMIDYSRPNWSYLRTPQFEPQQFEVSLSENRSHEPEME--RPKGA 102

Query: 478 ATGNRISRA 504
           + G R   A
Sbjct: 103 SNGKRARTA 111


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 481 WLLPVAISRVLPGWTQD 431
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 481 WLLPVAISRVLPGWTQD 431
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 481 WLLPVAISRVLPGWTQD 431
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 481 WLLPVAISRVLPGWTQD 431
           W++P+AI  V  GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 675 LXAADYAXKKRISXRSFDLFYXGLTLXGTNT 767
           L   D    K+I  + FD F+  +++  TNT
Sbjct: 38  LLLRDVELIKQIGVKEFDSFHDHVSVSNTNT 68


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 461 YRHWQQPL 484
           YRHWQ PL
Sbjct: 344 YRHWQIPL 351


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 350 VGRSLQAGLCARTPRFSPTAAPYPV 424
           V  ++Q   C RT   +  A+PYP+
Sbjct: 246 VTATVQLSTCTRTTLKNNRASPYPM 270


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 207 RYQAFPPGSSLVRSPVPTLPLTGY 278
           RY  +   +S++  P P +P  G+
Sbjct: 225 RYNPYLQAASMLPKPTPLVPQQGF 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,848
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)