Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F14
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.30 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
08_01_0156 - 1233431-1233925                                           29   6.4  
09_04_0166 + 15278511-15278862,15279790-15280049,15280153-152802...    28   8.5  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.5  
03_04_0061 - 16949038-16950006                                         28   8.5  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -3

Query: 395 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 216
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 215 LVS 207
             S
Sbjct: 137 RAS 139


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +1

Query: 115 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 273
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -3

Query: 368 LGANDLHRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGKRLVSL*SC 195
           LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G     +   
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAAADRVLGV 148

Query: 194 RVSPPLT 174
           R SP ++
Sbjct: 149 RASPTVS 155


>09_04_0166 +
           15278511-15278862,15279790-15280049,15280153-15280251,
           15280788-15280961,15283009-15283638
          Length = 504

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -2

Query: 198 LSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGXWPFAGTFAXH-VSTKVLRXAHIVGG 22
           L G+ATS + V    A+   G     PAT  F G + +      H V  KVL   H+   
Sbjct: 188 LIGYATSGMFVHHLGAQGALGVMALPPATLVFLGFFIYELKMYQHNVKEKVLNKVHMAVK 247

Query: 21  G 19
           G
Sbjct: 248 G 248


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 323 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 222
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 197 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 313
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,054
Number of Sequences: 37544
Number of extensions: 482475
Number of successful extensions: 1407
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)