Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F13
         (854 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0906 - 22467815-22468440,22468830-22468959,22469773-224698...    29   3.6  
05_07_0339 - 29375424-29377166,29377272-29377441,29377888-293780...    29   3.6  
10_07_0057 + 12460986-12461036,12461108-12461161,12461420-124614...    29   4.7  
01_01_0392 - 3024830-3025390                                           29   4.7  
10_06_0180 + 11526139-11526172,11526365-11527218                       28   8.3  
06_01_1082 - 8847795-8848033,8848511-8848724                           28   8.3  
03_02_1000 + 13111912-13112572,13112616-13113172                       28   8.3  

>08_02_0906 -
           22467815-22468440,22468830-22468959,22469773-22469852,
           22470331-22470678,22470775-22470936,22471817-22471928
          Length = 485

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 140 LHFSAAXSHQALAAPLXNSILTGASASA---VRQRLESARQGKGSIIQHVVNNLIIDKXR 310
           +HF    S  +    L  ++ +G+S  A    RQ+LE  +  KG + QHV ++L      
Sbjct: 180 VHFKVVRSRGSRKRQLTINVDSGSSDGADANPRQKLEHKKDAKGPLGQHVASHL------ 233

Query: 311 NTMEYCYK 334
              EYC K
Sbjct: 234 QPQEYCTK 241


>05_07_0339 -
           29375424-29377166,29377272-29377441,29377888-29378030,
           29378363-29378478,29378576-29378814,29378909-29379110,
           29379212-29379430,29379657-29379724,29379806-29379812,
           29380404-29380616
          Length = 1039

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 25/123 (20%), Positives = 56/123 (45%)
 Frame = +2

Query: 143 HFSAAXSHQALAAPLXNSILTGASASAVRQRLESARQGKGSIIQHVVNNLIIDKXRNTME 322
           H+S   S  ++A  +   I T  +A A    + ++      +IQ   + L+ +  RN + 
Sbjct: 402 HYSVPASSSSIAI-VTTVIFTATAAFATLLTVSTSSLLASGVIQRPPSYLVSEPSRNLLV 460

Query: 323 YCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERIAYGDG 502
           +    W+     +  +Y+ L+  L  +  Y+++ +   +    +G +T P+   IAY + 
Sbjct: 461 FALSRWLSINLPV--EYYELSKGLEWSIPYMRLPWEGPSADPFVGYSTMPA---IAYSEM 515

Query: 503 VDK 511
           +D+
Sbjct: 516 LDR 518


>10_07_0057 +
           12460986-12461036,12461108-12461161,12461420-12461482,
           12461666-12461716,12461996-12462057,12462156-12462318,
           12462829-12462939,12463029-12463166,12463248-12463322,
           12463420-12463540,12464827-12464981,12465080-12465154,
           12465270-12465473,12465670-12465786
          Length = 479

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -3

Query: 399 MMSLKFNGKYFLTISCPLPTHSL*QYSMVFRXLSMI 292
           MM L   GK    I CP+P+HSL   SMV R  +++
Sbjct: 152 MMHLLIRGKKD-GILCPIPSHSLYTDSMVLRGATLV 186


>01_01_0392 - 3024830-3025390
          Length = 186

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 143 HFSAAXSHQALAAPLXNSILTGASASAVRQRLE 241
           H +AA  H ALAAPL   +   A+A+A R R++
Sbjct: 30  HLAAAQGHLALAAPL---LADNAAAAAARDRIQ 59


>10_06_0180 + 11526139-11526172,11526365-11527218
          Length = 295

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 331 VAVLHGVPXLVNDQVVNYMLDDGALALARRFQALTDSTGGGAG 203
           +A++H       D + +YM   GA A     + + D  GGG G
Sbjct: 1   MAIIHDTSDQQEDNMRSYMDGGGAAAYEEEEEEVEDDDGGGGG 43


>06_01_1082 - 8847795-8848033,8848511-8848724
          Length = 150

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 644 RVVYGGNSADSTR--EXWFFQPAKYENDVLFFIYNRQFNDALELG 772
           +  Y G++A   R  + W      Y  DVL F YN++++D   +G
Sbjct: 42  KTYYVGDAAGWGRNLDWWLAGKTFYAGDVLVFKYNKEYHDVAVVG 86


>03_02_1000 + 13111912-13112572,13112616-13113172
          Length = 405

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
 Frame = -2

Query: 298 NDQVVNYMLDDGALALAR-------RFQALTDSTGGGAGEDAVXQW 182
           +D V+ + LD GALA+ +       +   L D  GGG G DA  QW
Sbjct: 262 DDDVLMFELD-GALAVLKGGAMSTLKLWVLDDDVGGGGGGDAGEQW 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,371,802
Number of Sequences: 37544
Number of extensions: 373534
Number of successful extensions: 1202
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)