Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F12
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249...    33   0.40 
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100...    32   0.53 
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313...    30   2.1  
03_02_0744 + 10880496-10880891                                         29   3.7  
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448...    29   6.5  
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084...    29   6.5  
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644...    28   8.6  

>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
            27125387-27125656,27126027-27126377,27126480-27126757,
            27126887-27128330
          Length = 1398

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 596  PFGTDGAKHRSGQTGQAPAYCLGYTHCSEVDHWDGDANLIKLI 468
            P G +   HR G+TG+A A  + YT  SE D W    +L+K++
Sbjct: 926  PTGIEDYVHRIGRTGRAGATGVSYTFFSEQD-WKYAGDLVKVL 967


>06_03_1306 + 29208882-29209547,29209641-29209854,29209947-29210023,
            29210132-29210171,29210254-29210323,29210419-29210488,
            29210747-29210995,29212810-29214700,29215458-29215771
          Length = 1196

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
 Frame = +1

Query: 235  KPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAVQNFKTTCLSDSLK 414
            K +SE      +F    WA +++  +      +E    DN  WSAA    K T    ++ 
Sbjct: 910  KLVSERINLVEMFSSPEWASSDLASRSSFRHVYEVVKTDNAFWSAAADILKLTDPLITVL 969

Query: 415  PQGVDTNCP---AYDIIHCA 465
             +    NCP    YD + CA
Sbjct: 970  YKLEADNCPIGILYDAMDCA 989


>08_01_0356 +
           3131214-3132443,3132584-3132778,3132892-3132972,
           3133324-3133383,3133466-3133560,3133660-3133816,
           3133896-3134021,3134398-3134478,3134557-3134647,
           3134735-3134868,3135068-3135136,3135219-3135308,
           3135405-3135508,3135594-3135762,3136066-3136134
          Length = 916

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +1

Query: 196 PKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSAAV 375
           PK  QP    + +KP++    T    K  G   ++  D+K ++    +F+K   + SA++
Sbjct: 179 PKIEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDSEDEKPLA---ARFSKVTGNASASI 235

Query: 376 QNFKTTCLSDSLK 414
            + K   LS S+K
Sbjct: 236 SSSKDKVLSASIK 248


>03_02_0744 + 10880496-10880891
          Length = 131

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 247 ECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPD 360
           EC       +E   A ++  D+KK SD  E++ KDNP+
Sbjct: 85  ECAAAWDEVEELSAAASHARDRKKDSDPLEEYCKDNPE 122


>08_02_0099 +
           12343518-12343678,12344193-12344393,12344669-12344846,
           12347201-12347463,12347596-12347874,12348045-12349182,
           12349303-12349473
          Length = 796

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 520 CVYPRQYAGACPVCPERCFAPSVPNGSCNA 609
           CV+   +   C  CP    APS PNG+C++
Sbjct: 381 CVFGLPWLAPCRPCPT-AGAPSPPNGTCHS 409


>07_03_0741 -
           21107566-21107838,21107964-21108102,21108189-21108426,
           21108629-21108836,21108945-21109066,21109146-21109271,
           21109356-21109774,21109844-21110268
          Length = 649

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 475 FIKFASPSQWSTSEQCVYPRQYAGACPV 558
           F+ F SP QW  S+   YP Q + +  V
Sbjct: 127 FMDFLSPDQWQVSQMIWYPEQASASVDV 154


>01_01_0827 +
           6443319-6446085,6446317-6446407,6446502-6448017,
           6448164-6448243,6449045-6449129,6449221-6449312,
           6449388-6449456,6449544-6449580,6449662-6449744,
           6450427-6450873,6450978-6451014,6451101-6451158,
           6451243-6451382,6451610-6451675,6451794-6451908,
           6453261-6453299,6453482-6453543
          Length = 1927

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
 Frame = +2

Query: 482 NSHLRPNGRLRSSACIRGSTRAP----VPSA----LNGASPHQYRMVRVTRASPXPAHRD 637
           N H  P   +  S CI  +        VP A    +NG  PH YR+ +       P H +
Sbjct: 332 NGHRMPENPITPSHCIERAALKEHLNHVPHAKAAVMNGQMPHSYRLAQ--NPILPPNHIE 389

Query: 638 HVQTSEHLSE 667
             Q  E+LSE
Sbjct: 390 GYQVMENLSE 399


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,950,308
Number of Sequences: 37544
Number of extensions: 363362
Number of successful extensions: 1008
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)