Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F12
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117394-1|AAI17395.1| 360|Homo sapiens chromosome 12 open read... 31 4.2
BC117392-1|AAI17393.1| 360|Homo sapiens chromosome 12 open read... 31 4.2
BC044617-1|AAH44617.1| 265|Homo sapiens C12orf42 protein protein. 31 4.2
AK058052-1|BAB71641.1| 360|Homo sapiens protein ( Homo sapiens ... 31 4.2
L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein. 30 9.6
EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precurs... 30 9.6
BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein pr... 30 9.6
BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4) precu... 30 9.6
AK124446-1|BAC85853.1| 539|Homo sapiens protein ( Homo sapiens ... 30 9.6
AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2 ... 30 9.6
AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein. 30 9.6
>BC117394-1|AAI17395.1| 360|Homo sapiens chromosome 12 open reading
frame 42 protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 488 HLRPNGRLRSSACIRGSTR-APVPSALNGASPH--QYRMVRV-TRASPXPAHRDHVQTSE 655
H + R ++ + G+ AP+P L GAS H R+++V + A P P R H S+
Sbjct: 290 HTPRDRRPQADTSLHGNLAGAPLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQ 348
Query: 656 HLSEXCINAAIN 691
LS +NA ++
Sbjct: 349 ALSRPVVNAHLH 360
>BC117392-1|AAI17393.1| 360|Homo sapiens chromosome 12 open reading
frame 42 protein.
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 488 HLRPNGRLRSSACIRGSTR-APVPSALNGASPH--QYRMVRV-TRASPXPAHRDHVQTSE 655
H + R ++ + G+ AP+P L GAS H R+++V + A P P R H S+
Sbjct: 290 HTPRDRRPQADTSLHGNLAGAPLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQ 348
Query: 656 HLSEXCINAAIN 691
LS +NA ++
Sbjct: 349 ALSRPVVNAHLH 360
>BC044617-1|AAH44617.1| 265|Homo sapiens C12orf42 protein protein.
Length = 265
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 488 HLRPNGRLRSSACIRGSTR-APVPSALNGASPH--QYRMVRV-TRASPXPAHRDHVQTSE 655
H + R ++ + G+ AP+P L GAS H R+++V + A P P R H S+
Sbjct: 195 HTPRDRRPQADTSLHGNLAGAPLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQ 253
Query: 656 HLSEXCINAAIN 691
LS +NA ++
Sbjct: 254 ALSRPVVNAHLH 265
>AK058052-1|BAB71641.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ25323 fis, clone TST00323. ).
Length = 360
Score = 31.5 bits (68), Expect = 4.2
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 488 HLRPNGRLRSSACIRGSTR-APVPSALNGASPH--QYRMVRV-TRASPXPAHRDHVQTSE 655
H + R ++ + G+ AP+P L GAS H R+++V + A P P R H S+
Sbjct: 290 HTPRDRRPQADTSLHGNLAGAPLP-LLAGASTHFPSKRLIKVCSSAPPRPTRRFHTVCSQ 348
Query: 656 HLSEXCINAAIN 691
LS +NA ++
Sbjct: 349 ALSRPVVNAHLH 360
>L77864-1|AAB93631.1| 710|Homo sapiens stat-like protein protein.
Length = 710
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 482 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 535
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 536 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 587
>EF103274-1|ABL07489.1| 492|Homo sapiens amyloid beta A4 precursor
protein-binding family B member 1 transcript variant
protein.
Length = 492
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 264 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 317
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 318 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 369
>BX538185-1|CAD98057.1| 502|Homo sapiens hypothetical protein
protein.
Length = 502
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 274 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 327
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 328 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 379
>BC010854-1|AAH10854.1| 708|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1 (Fe65)
protein.
Length = 708
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 480 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 533
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 534 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 585
>AK124446-1|BAC85853.1| 539|Homo sapiens protein ( Homo sapiens
cDNA FLJ42455 fis, clone BRACE2015314. ).
Length = 539
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -3
Query: 555 GTGARVLPRIHALLRSRPLGRRC--EFDKADQSTV 457
G +R LPR AL RSR L RC ++++A Q T+
Sbjct: 162 GQSSRALPRSRALPRSRELPARCRRDWERAPQRTL 196
>AF394214-1|AAL79526.1| 712|Homo sapiens adaptor protein FE65a2
protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 482 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 535
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 536 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 587
>AF029234-1|AAC79942.1| 710|Homo sapiens Fe65 protein protein.
Length = 710
Score = 30.3 bits (65), Expect = 9.6
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +1
Query: 178 YSCLGNPKXIQPEVSEKCNKPISECXKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNP 357
+ C K I + E C+K ++E RC+ +G + +D K+ D Q P
Sbjct: 482 FRCEAPAKNIATSLHEICSKIMAERRNARCLV--NGLS----LDHSKLVDVPFQVEFPAP 535
Query: 358 DWSAAVQNFKTTCLSDS--LKPQGVDTNCPAYDIIHCALISFIKFASPSQWSTSEQCVYP 531
+ VQ F+ L + KP GVD +I+ AL S + +S QW+ S V P
Sbjct: 536 K-NELVQKFQVYYLGNVPVAKPVGVD-------VINGALESVLSSSSREQWTPSHVSVAP 587
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,502,842
Number of Sequences: 237096
Number of extensions: 1890473
Number of successful extensions: 4138
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4130
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -