Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F10
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.007
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.050
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.050
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.15
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.15
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.15
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 32 0.47
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 32 0.47
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 32 0.47
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 32 0.47
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.62
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.3
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 3.3
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 29 4.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 7.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +3
Query: 624 PXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTXXX 803
P P P P P A PPPP+ P PP P +
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 804 XXAXXXPPPXXXXXPPXXP 860
A PPP PP P
Sbjct: 315 PQAGGSPPPAGTGSPPPPP 333
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/85 (23%), Positives = 21/85 (24%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPKXPXKPX 798
PP PP P P P P G PP + P G P P P
Sbjct: 242 PPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 799 XXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +3
Query: 624 PXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTXXX 803
P P P P P A PPPP+ P PP P +
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 804 XXAXXXPPPXXXXXPPXXP 860
A PPP PP P
Sbjct: 336 PQAGGSPPPAGTGSPPPPP 354
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/85 (23%), Positives = 21/85 (24%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPKXPXKPX 798
PP PP P P P P G PP + P G P P P
Sbjct: 263 PPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 799 XXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +3
Query: 624 PXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTXXX 803
P P P P P A PPPP+ P PP P +
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 804 XXAXXXPPPXXXXXPPXXP 860
A PPP PP P
Sbjct: 321 PQAGGSPPPAGTGSPPPPP 339
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/85 (23%), Positives = 21/85 (24%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPKXPXKPX 798
PP PP P P P P G PP + P G P P P
Sbjct: 248 PPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 799 XXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPP 329
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTX 797
P P P P P P PPPP P G PP P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 357
Query: 798 XXXXAXXXPPPXXXXXPP 851
PPP PP
Sbjct: 358 AGPGMYPPPPPSRPPAPP 375
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXX-PXXLXGHPXPKXPXKP 795
P PP PP P P R P PP P+ P + G P P P
Sbjct: 285 PRPPPPPSSGMWPPPPPP--PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
Query: 796 XXXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P P P
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/92 (25%), Positives = 23/92 (25%), Gaps = 7/92 (7%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXL---XGHPXPKXPX 789
PP PP P P P P PP P P G P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 790 KPXXXXXPXXXXXPXP----XXXPXXXPXPTP 873
P P P P P P P P
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTX 797
P P P P P P PPPP P G PP P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS 367
Query: 798 XXXXAXXXPPPXXXXXPP 851
PPP PP
Sbjct: 368 AGPGMYPPPPPSRPPAPP 385
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXX-PXXLXGHPXPKXPXKP 795
P PP PP P P R P PP P+ P + G P P P
Sbjct: 295 PRPPPPPSSGMWPPPPPP--PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
Query: 796 XXXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P P P
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/92 (25%), Positives = 23/92 (25%), Gaps = 7/92 (7%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXL---XGHPXPKXPX 789
PP PP P P P P PP P P G P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 790 KPXXXXXPXXXXXPXP----XXXPXXXPXPTP 873
P P P P P P P P
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 726 PPPPQXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PPPP GPPP P PPP PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +1
Query: 601 ISXXXXPPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPK 780
I+ PP PP PP P G P G PP P P G P
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPP------GGLPPITGGPPPPPPPGGLPPISGGPP--- 759
Query: 781 XPXKPXXXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P P P P P
Sbjct: 760 -PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTX 797
P P P P P P PPPP G PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 798 XXXXAXXXPPPXXXXXPPXXP 860
PP PP P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 726 PPPPQXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PPPP GPPP P PPP PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +1
Query: 601 ISXXXXPPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPK 780
I+ PP PP PP P G P G PP P P G P
Sbjct: 709 ITGGPPPPPGLPPITGGPPPPPPP------GGLPPITGGPPPPPPPGGLPPISGGPP--- 759
Query: 781 XPXKPXXXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P P P P P
Sbjct: 760 -PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTX 797
P P P P P P PPPP G PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 798 XXXXAXXXPPPXXXXXPPXXP 860
PP PP P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 726 PPPPQXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PPPP GPPP P PPP PP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/91 (27%), Positives = 26/91 (28%)
Frame = +1
Query: 601 ISXXXXPPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPK 780
I+ PP PP PP P G P G PP P P G P
Sbjct: 292 ITGGPPPPPGLPPITGGPPPPPPP------GGLPPITGGPPPPPPPGGLPPISGGPP--- 342
Query: 781 XPXKPXXXXXPXXXXXPXPXXXPXXXPXPTP 873
P P P P P P P P
Sbjct: 343 -PPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/81 (23%), Positives = 19/81 (23%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTX 797
P P P P P P PPPP G PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 798 XXXXAXXXPPPXXXXXPPXXP 860
PP PP P
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPP 371
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 485 LHLPSAVLLKPVAQPPTKFSXPSFSVVVLPADVGVGTIVGWVTNSTTPRCTEPDDTLS 312
LH PSA ++P Q PSF V+ + + + G V + STT T+P T+S
Sbjct: 392 LHAPSATSVQPTEQVVINNVTPSFPVLEI-SKLPTGAPVTFTATSTTLMVTQPTVTVS 448
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 485 LHLPSAVLLKPVAQPPTKFSXPSFSVVVLPADVGVGTIVGWVTNSTTPRCTEPDDTLS 312
LH PSA ++P Q PSF V+ + + + G V + STT T+P T+S
Sbjct: 392 LHAPSATSVQPTEQVVINNVTPSFPVLEI-SKLPTGAPVTFTATSTTLMVTQPTVTVS 448
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 485 LHLPSAVLLKPVAQPPTKFSXPSFSVVVLPADVGVGTIVGWVTNSTTPRCTEPDDTLS 312
LH PSA ++P Q PSF V+ + + + G V + STT T+P T+S
Sbjct: 392 LHAPSATSVQPTEQVVINNVTPSFPVLEI-SKLPTGAPVTFTATSTTLMVTQPTVTVS 448
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 485 LHLPSAVLLKPVAQPPTKFSXPSFSVVVLPADVGVGTIVGWVTNSTTPRCTEPDDTLS 312
LH PSA ++P Q PSF V+ + + + G V + STT T+P T+S
Sbjct: 392 LHAPSATSVQPTEQVVINNVTPSFPVLEI-SKLPTGAPVTFTATSTTLMVTQPTVTVS 448
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.62
Identities = 21/77 (27%), Positives = 22/77 (28%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXPXXLXGHPXPKXPXKPX 798
P PP PP P G +P PP P P L G P P P P
Sbjct: 531 PRPAPPPVSSIPPPPPIAGLLAANGTNVPIP-----PPPPPPLPQNLSGAPPPPPPPPPM 585
Query: 799 XXXXPXXXXXPXPXXXP 849
P P P
Sbjct: 586 LGGPPPPPPPPGGLMGP 602
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -1
Query: 859 GXXGGXXXXXGGGXXXAXXXXXVXXGVWXGGGPKGXXXXXWGGGGXXXAXXGXXXXPGXX 680
G GG GGG A G GGG G GGGG G G
Sbjct: 57 GGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
Query: 679 XXXXXXXGXXXXGXXGXXGXG 617
G G G G
Sbjct: 117 CGGGGGGCGGGGGGCGGGGGG 137
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = -1
Query: 859 GXXGGXXXXXGGGXXXAXXXXXVXXGVWXGGGPKGXXXXXWGGGGXXXAXXGXXXXPGXX 680
G GG GGG G GGG G GGGG G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 679 XXXXXXXGXXXXGXXGXXGXG 617
G G G G
Sbjct: 144 SGGCGGGSSGGCGGGGGGGCG 164
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -1
Query: 859 GXXGGXXXXXGGGXXXAXXXXXVXXGVWXGGGPKGXXXXXWGGGGXXXAXXGXXXXPGXX 680
G GG GGG A G GGG G GGGG G G
Sbjct: 57 GGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 116
Query: 679 XXXXXXXGXXXXGXXGXXGXG 617
G G G G
Sbjct: 117 CGGGGGGCGGGGGGCGGGGGG 137
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/81 (25%), Positives = 21/81 (25%)
Frame = -1
Query: 859 GXXGGXXXXXGGGXXXAXXXXXVXXGVWXGGGPKGXXXXXWGGGGXXXAXXGXXXXPGXX 680
G GG GGG G GGG G GGGG G G
Sbjct: 84 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS 143
Query: 679 XXXXXXXGXXXXGXXGXXGXG 617
G G G G
Sbjct: 144 SGGCGGGSSGGCGGGGGGGCG 164
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +3
Query: 618 PXPXXPXXPXXXXPXXXXXXXXXPGXXXXPXXAXXXPP-PPQXXXXXPXGPPPXQT 782
P P P P P PG P PP PP P GPP T
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPT 276
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 769 PXPKXPXKPXXXXXPXXXXXPXPXXXPXXXPXPTPXH 879
P PK KP P P P P P P P H
Sbjct: 36 PFPKPMPKPKPKPKPMPKHKPKPFPKPMLFPKPMPKH 72
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 730 PXPNXXPXXLXGHPXPKXPXKPXXXXXPXXXXXPXPXXXPXXXPXPTPXH 879
P P P + P P KP P P P P P P P H
Sbjct: 142 PKPMLFPKPMP-FPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPKPMPKH 190
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -1
Query: 772 GGGPKGXXXXXWGGGGXXXAXXGXXXXPGXXXXXXXXXGXXXXGXXGXXGXG 617
GGGP G +GGGG G G G G G G G
Sbjct: 141 GGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 730 PXPNXXPXXLXGHPXPKXPXKPXXXXXPXXXXXPXPXXXPXXXPXPTP 873
P PN P P PK KP P P P P P P P
Sbjct: 195 PKPNPKPEP---KPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKP 239
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +1
Query: 688 RGXXLPXXGRXXXPPXPNXXPXXLXGHPXPKXPXKPXXXXXPXXXXXPXPXXXPXXXPXP 867
+G L + P P P P PK KP P P P P P P
Sbjct: 147 KGGVLKNEPKLKSKPNPKPEPKPKP-KPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKP 205
Query: 868 TP 873
P
Sbjct: 206 KP 207
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 552 HR-NEIKRNYKTKNLTAWVSKGRFTSAISSSLKAC 451
HR N+IK N+K+ LT W+ G+ S C
Sbjct: 96 HRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVIC 130
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = -1
Query: 859 GXXGGXXXXXGGGXXXAXXXXXVXXGVWXGGGPKGXXXXXWGGGGXXXAXXGXXXXPGXX 680
G GG G G A G GGG G GGGG G G
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Query: 679 XXXXXXXGXXXXGXXGXXGXG 617
G G G G G
Sbjct: 154 GGCGGGGGGCGGGGGGCGGGG 174
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 729 PPPQXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PPP P PPP P A PPP P P
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPPVTMYQPCMVP 286
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = +3
Query: 726 PPPP--QXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PPPP PPP P T PPP PP P
Sbjct: 293 PPPPVRDVTPARSPSPPPLPPPITTANRETQADAPPPQIIQLPPQQP 339
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 687 PGXXXXPXXAXXXPPPPQXXXXXPXGPPPXQTPXXTXXXXXAXXXPPPXXXXXPPXXP 860
PG A PPPP PPP P A P PP P
Sbjct: 526 PGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 619 PPXXXPPXXXXXPPXPXXXXPXXRGXXLPXXGRXXXPPXPNXXP 750
PP PP PP P P R P G PP P P
Sbjct: 50 PPPFGPPPPWDRPPPPWRRPPWHR---RPPWGLPPPPPPPEPEP 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,280,971
Number of Sequences: 27780
Number of extensions: 306864
Number of successful extensions: 1697
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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