Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F08
(877 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 23 2.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 7.3
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 9.6
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 21 9.6
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 9.6
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 9.6
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 147 MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 242
+L IPT T +SSF+I+S P T + ++
Sbjct: 8 ILVIPTMARTPLKSSFSISSILPETALEAPKS 39
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 544 LPADSRACLVLAVAVGRSAIVALNIXAQRQSETVALVHKLNRVF 413
LP DS L L V + S V LN+ A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 544 LPADSRACLVLAVAVGRSAIVALNIXAQRQSETVALVHKLNRVF 413
LP DS L L V + S V LN+ A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 544 LPADSRACLVLAVAVGRSAIVALNIXAQ 461
LP DS L L V + S V LN+ A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 544 LPADSRACLVLAVAVGRSAIVALNIXAQ 461
LP DS L L V + S V LN+ A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 544 LPADSRACLVLAVAVGRSAIVALNIXAQ 461
LP DS L L V + S V LN+ A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 422 IKLMYKRDGLALTLSXDVQGDDGRPAYGDGKDKTSPRV 535
IKL+ +++ LS D ++ + G+ KDK P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.6
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 121 NNYSGLXLWSVE 86
NN +G+ +WS+E
Sbjct: 341 NNLAGVMIWSIE 352
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 135 WHLCMLQIPTSLTTFWRSS 191
+H+ M +PT L +F++S+
Sbjct: 59 YHIFMHIVPTKLISFYKST 77
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 542 KLIALWENNKVYFKILNTERNQYLVL 619
KL+ L + + + IL+ + N YLVL
Sbjct: 7 KLLLLDSSTQPNYLILSNKNNTYLVL 32
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,226
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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