Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F07
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052117-1|AAK93541.1|  412|Drosophila melanogaster SD06613p pro...    29   6.0  
AE014297-3726|AAN14041.1|  412|Drosophila melanogaster CG11844-P...    29   6.0  
AE014297-3725|AAN14040.1|  412|Drosophila melanogaster CG11844-P...    29   6.0  
AE014297-3724|AAF56404.2|  443|Drosophila melanogaster CG11844-P...    29   6.0  

>AY052117-1|AAK93541.1|  412|Drosophila melanogaster SD06613p
           protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +3

Query: 696 RGP---RSFDNRGXREFDRXSGSXKP-V*XXRXREGAGPH 803
           RGP   R+ +  G REFDR SGS +  V     REG G H
Sbjct: 132 RGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAH 171


>AE014297-3726|AAN14041.1|  412|Drosophila melanogaster CG11844-PC,
           isoform C protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +3

Query: 696 RGP---RSFDNRGXREFDRXSGSXKP-V*XXRXREGAGPH 803
           RGP   R+ +  G REFDR SGS +  V     REG G H
Sbjct: 132 RGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAH 171


>AE014297-3725|AAN14040.1|  412|Drosophila melanogaster CG11844-PA,
           isoform A protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +3

Query: 696 RGP---RSFDNRGXREFDRXSGSXKP-V*XXRXREGAGPH 803
           RGP   R+ +  G REFDR SGS +  V     REG G H
Sbjct: 132 RGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAH 171


>AE014297-3724|AAF56404.2|  443|Drosophila melanogaster CG11844-PB,
           isoform B protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +3

Query: 696 RGP---RSFDNRGXREFDRXSGSXKP-V*XXRXREGAGPH 803
           RGP   R+ +  G REFDR SGS +  V     REG G H
Sbjct: 163 RGPPRVRTGEKFGKREFDRQSGSDRTGVKSIDKREGGGAH 202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,769,378
Number of Sequences: 53049
Number of extensions: 449462
Number of successful extensions: 877
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)