Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F05
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    32   0.46 
Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    30   2.5  
U00063-5|AAK18963.1|  182|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +2

Query: 200 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 370
           DP+   +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P G PY 
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401

Query: 371 KPTPFPGARG 400
              P P   G
Sbjct: 402 SDVPAPYPSG 411


>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           + SV+   P     QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 80  SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           + SV+   P     QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 51  SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 90


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +2

Query: 179 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 319
           + SV+   P     QP VGN Y+P    P   +PP  Y     GY P
Sbjct: 80  SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119


>U00063-5|AAK18963.1|  182|Caenorhabditis elegans Hypothetical
           protein F56C9.8 protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
 Frame = +2

Query: 107 FFMIFVLALLAMANAQDPVRVVENADSVVINDPDPFFA--QPTVGNGYEPIDNRPYIVNP 280
           F  +   A++    + D  R+    +S   N P   +   QP     Y P   + Y  N 
Sbjct: 37  FIYVIYAAVVRSMRSDDKQRLHSGRNSAQWNQPQQQYREQQPASDFPYNPAPTQNYDYNA 96

Query: 281 PKDYNPNGNGYEPIDNGAYYVDRPQ 355
           P     N   + P+ +   Y  +PQ
Sbjct: 97  PIRTPVNPTSFTPVPSVTQYSTQPQ 121


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 288 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 386
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 331
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,870,104
Number of Sequences: 27780
Number of extensions: 341887
Number of successful extensions: 878
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)