Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F03
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.76 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   7.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   7.1  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +3

Query: 495 WMASACYSKRDLTLTQTRPPRLFSLNCNDSSNAAVTLALSTTGQFTLPESCCVKKSILST 674
           + A +C SK+    T  +   L  L C D ++     AL+  G          K ++   
Sbjct: 166 YSADSCDSKKKKGPTPRQQEEL-CLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQC 224

Query: 675 FXGNNCTVD 701
             GNNC +D
Sbjct: 225 KYGNNCEID 233


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 398 RPCSDSRVSLHSIPRTRA 345
           R C+ S VSLHS+   R+
Sbjct: 17  RKCTVSNVSLHSLKNKRS 34


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 346 ARVLGMLWSDTRESLHGRHVRNLFAGDHHCASGXQRPPLHLRREH 480
           A ++  +WS ++  +   H+      DH       RPP H   EH
Sbjct: 227 AVIVRTIWSKSKLLIPVGHIPIRQCDDHR-----DRPPRHFHEEH 266


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 369 PQHPKNASTNIT 334
           PQ PKNA+ N+T
Sbjct: 493 PQVPKNATDNLT 504


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,576
Number of Sequences: 336
Number of extensions: 2160
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)