Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F03
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800     32   0.50 
02_02_0310 - 8842286-8843314                                           31   1.2  
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739...    30   2.7  
01_06_0288 - 28228673-28228744,28228866-28229071,28229316-282295...    29   6.2  
01_06_0266 - 28020787-28021067,28021654-28021684                       29   6.2  
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600...    28   8.2  

>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
          Length = 863

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 636 PESCCVKKSILSTFXGNNCTVD 701
           P SCCV+K I+S F   NCT D
Sbjct: 53  PASCCVRKIIVSNFLPLNCTKD 74


>02_02_0310 - 8842286-8843314
          Length = 342

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -1

Query: 445 HHLHNDDHQQKDCVRDDHAVTLAYRSTASQEREHEHYSPDDYEDPRTD 302
           HH H+D++++ +  + D A     R  +   R H H+  +D  + R +
Sbjct: 194 HHHHHDENEEDEHEQADEASPAVERLISFHRRRHHHHHHEDDHEQREE 241


>07_03_1567 -
           27772815-27773302,27773471-27773561,27773641-27773988,
           27774929-27775110,27775191-27775368,27775453-27775605,
           27775993-27776232,27776369-27776449,27776485-27776730,
           27777151-27777240,27777536-27777778,27778365-27778529,
           27779017-27779080,27779162-27779286,27779383-27779476,
           27779647-27779714,27779798-27779989,27780618-27780752,
           27780847-27780934,27781014-27781107,27781484-27781547,
           27781657-27781708,27781911-27782014,27782099-27782158,
           27782687-27782770,27782892-27783125,27783442-27783864,
           27784675-27784736,27784867-27785521
          Length = 1700

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 354 NASTNITAPTTMKIHGPTARWGFQXGFDHGPVQQXRD 244
           N+S N +     KI+GP+  WG     D GP Q  ++
Sbjct: 68  NSSENKSVQNARKINGPSGPWGTNFLKDCGPTQTAKE 104


>01_06_0288 -
           28228673-28228744,28228866-28229071,28229316-28229554,
           28229649-28229705,28229787-28229873,28229963-28230507,
           28231574-28231714
          Length = 448

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +1

Query: 436 ASGXQRPPLHLRREH---QGEHYGWRRR 510
           A+  +  PL LRRE    +GE  GWRRR
Sbjct: 3   AAAREEQPLLLRREEGEEEGEEVGWRRR 30


>01_06_0266 - 28020787-28021067,28021654-28021684
          Length = 103

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 351 ASTNITAPTTMKIHGPTARWGFQXG 277
           +S   TAPT   I G  A WGF+ G
Sbjct: 16  SSNTATAPTVAAIIGEAALWGFEGG 40


>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
            28960097-28960424,28960524-28960661,28960765-28961020,
            28961529-28961626,28963104-28963367,28964395-28964584
          Length = 1067

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 478  ALAVGEEEDAXHHLHNDDHQQKDC 407
            ++++ E  D   H HN++H+ +DC
Sbjct: 969  SISIEESSDHHEHHHNEEHKAEDC 992


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,712,088
Number of Sequences: 37544
Number of extensions: 269784
Number of successful extensions: 875
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)