Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F03
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 42 6e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 40 0.002
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 36 0.037
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 34 0.11
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 32 0.45
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 4.2
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 29 4.2
Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical pr... 29 5.5
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 7.3
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 53.6 bits (123), Expect = 2e-07
Identities = 27/104 (25%), Positives = 53/104 (50%)
Frame = +2
Query: 308 PWIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKE 487
P + +V+G++ +L FLGCCGAIRE++C+ V++A + +S +
Sbjct: 53 PILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRL 112
Query: 488 SIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 619
I + + + ++ E+A + + + FECCG T + ++
Sbjct: 113 GIGNQLQTGMVRYHESRGVESA---WDKTHQLFECCGVTNSSDW 153
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/110 (24%), Positives = 42/110 (38%)
Frame = +2
Query: 290 PHLAVGPWIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTY 469
P L +I IV+GAVM V+A LGCCG S ++ Y+
Sbjct: 108 PTLFAFSYIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYK 167
Query: 470 GESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 619
+ + + D + + + + LQ F CCGN G ++
Sbjct: 168 KDGLDVELSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDF 215
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/96 (21%), Positives = 40/96 (41%)
Frame = +2
Query: 311 WIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 490
W + GA++ ++ + GC GA + + C + + F E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 491 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 598
+ + + R +++ A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNR--YSSETAFKDAFDTVQEKFECCG 151
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/98 (28%), Positives = 39/98 (39%)
Frame = +2
Query: 311 WIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 490
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 491 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNT 604
I + KK S A +Q F+CCG T
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT 159
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +2
Query: 290 PHLAVGPWIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTY 469
P L ++ +V G ++ FLG CGA+ S +++ + Y
Sbjct: 21 PLLKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFY 80
Query: 470 GE---SIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY 619
+ S+KE++ + V + + ++ +LQ +CCG+ G +Y
Sbjct: 81 KDKVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +2
Query: 311 WIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYA 409
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/100 (20%), Positives = 40/100 (40%)
Frame = +2
Query: 311 WIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 490
W ++VG + F++ F GC G++RE+ + Y+ + + +
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNY 145
Query: 491 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGA 610
I + + + D D + + +Q + CCG GA
Sbjct: 146 IRNLLNDVVVGYRD---DPDLQLLIDSMQETWMCCGINGA 182
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 311 WIFIVVGAVMFVLAFLGCCGAIRESHCMVVTYA 409
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.45
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 507 PTPSIMLSLMLSP*VKRRTLXTTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNASTNIT 334
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 333 APTTMK 316
PTTMK
Sbjct: 213 TPTTMK 218
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 560 VFSELQRQFECCGNTGAINYG 622
+ +QR++ CCG GAI+YG
Sbjct: 276 IADRVQRRYCCCGYNGAIDYG 296
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -1
Query: 511 HADAIHNALLDALAVGEEEDAXHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQEREHEH 338
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 337 YSPDDYEDPRTDS 299
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -1
Query: 511 HADAIHNALLDALAVGEEEDAXHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQEREHEH 338
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 337 YSPDDYEDPRTDS 299
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 552 PRLFSLNCNDSSNAAVTLALSTTGQFTLPESCCVKK 659
P L +LNC SSN+ + L + Q +L CC KK
Sbjct: 258 PFLLTLNC--SSNSVIFLMYNLEVQKSLKSCCCAKK 291
>Z81486-7|CAB03989.1| 480|Caenorhabditis elegans Hypothetical
protein C53A5.9 protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 507 PTPSIMLSLMLSP*VKRRTLXTTCTMMITSKKIAYVTTMQ*LSR-IAPQHPKNASTNITA 331
PTPS LS ++ L T+ + S+ +Y M LS I P H KNAS ++TA
Sbjct: 6 PTPSWFLS--------QKGLCTSHKICKLSRCFSYFIVMDFLSSVILPSHTKNASQSVTA 57
Query: 330 PTTMK 316
+K
Sbjct: 58 LDELK 62
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 430 DDHQQKDCVRDDHAVTLAYRSTASQEREHEHYSPDDYEDP 311
+D ++KD R+DH +S ++ EHE + P + P
Sbjct: 502 EDGREKDDFREDHGREDHGKSEVPEKVEHEQHPPQSHGSP 541
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +1
Query: 313 DLHSRRGCNVRARVLGMLWSDTRESLHGRHVRNLFAGDHHCASGXQRPPLHLRREHQGEH 492
D R+ N R +LG W D RE ++V FA H G PL+
Sbjct: 9 DTFLRKDINTRQIILGSFWRDERE----QNVDGRFAVIHFLGDGRIEHPLYCFSIQANNR 64
Query: 493 YGWRRRVIQK 522
Y + +Q+
Sbjct: 65 YLITKATVQR 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,623,313
Number of Sequences: 27780
Number of extensions: 210707
Number of successful extensions: 736
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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