Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_F03
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    56   5e-10
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   2.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   8.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.2  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 55.6 bits (128), Expect = 5e-10
 Identities = 20/30 (66%), Positives = 28/30 (93%)
 Frame = +2

Query: 320 IVVGAVMFVLAFLGCCGAIRESHCMVVTYA 409
           IV+G+++FV++F GCCGAIRESHCM +T+A
Sbjct: 56  IVLGSIIFVISFFGCCGAIRESHCMTITFA 85


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 518 KKRSDANADEAAEAVFSELQRQ 583
           +KR DA  DE+ EA+F  + RQ
Sbjct: 292 EKRDDAK-DESVEAIFQSILRQ 312


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -1

Query: 754 FHFW*SSPILGPXP-GFXASTVQLLPXKVERMLFLTQQDSGNVNWPVVDSASVTAAFEL 581
           F FW S  ++GP P  F  +T  L+  K     F+        N P+V   +  + F L
Sbjct: 26  FDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLL 84


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 482 KESIMDGVGVLFKKRSDANADEAAEAVFSELQR 580
           K S+M   G+  +     + DE    VFS LQR
Sbjct: 96  KRSLMGAQGLSIRGLQINHEDETIRPVFSTLQR 128


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 346 ARVLGMLWSDTRESLHGRHVRNLFA 420
           ARVLGM+W+     +   +  NL A
Sbjct: 636 ARVLGMVWAGFAMIIVASYTANLAA 660


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 556 LGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDAXHHLHNDDHQQKDCVRDDHAVTLA 377
           L GL  ++ R LF      +H+A  D + VGE+  A   L     + K  + + +    A
Sbjct: 397 LNGLEGLTGRGLFISDIP-LHDATRDVILVGEQARAQDGLRRRMDKLKSSIEEANLAVSA 455

Query: 376 YR 371
            R
Sbjct: 456 ER 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,351
Number of Sequences: 438
Number of extensions: 2837
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)