Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_F02
(1137 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 41 4e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 5e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.074
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.074
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.30
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.52
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.91
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.8
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 27 6.4
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 6.4
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 734 PXQPRXXXXPRRP-PXPPPXPXSXPPPXPPAXP-XAAPPXAPPHXPXP 871
P +P+ P+ P PPP P S PPP P A P A PP APP P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPP-PPLP 1736
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRP 880
P PP P P S PP PA P +APP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPP--MPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.7 bits (66), Expect = 0.39
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +2
Query: 761 PRRPPX--PPPXPXSXPPPXP---PAXPXAAP-PXAPPHXPXPXRP 880
P RP PP PPP P P P A P P PP P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.52
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Frame = +2
Query: 761 PRRPPXPPP-XPXSXPP-----PXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPS 910
P P PP P S P P PP P + PP P P P P A P P+
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP-PPSAPPMPAGPPSAPPPPLPA 1737
Score = 29.5 bits (63), Expect = 0.91
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPS 910
PP P P S P P + APP PP P P RPS
Sbjct: 1355 PPVRPAVPTSPKPQIPDSSNVHAPP--PPVQPMNAMPSHNAVNARPS 1399
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.3 bits (90), Expect = 5e-04
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 743 PRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPP-HXPXPXRPXRAXXP 898
P P P PP P S PPP PA P +PP AP P P + P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXP--PPXPPAXPXAAPPXAPPHXPXPXRPXRAXXP 898
P RP PPP P S P P P P + PP A P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 743 PRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSR 913
PR P P PP P S PP P + P A P AP P + P P +
Sbjct: 145 PRPSIPPPSPASAPPIP-SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Score = 34.3 bits (75), Expect = 0.032
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXP---PAXPXAAPPXAPPHXPXPXRP 880
P P R P PP P S PPP P P P APP P P P +P
Sbjct: 128 PAPPTPQSELRPPTSAPPRP-SIPPPSPASAPPIPSKAPP-IPSSLPPPAQP 177
Score = 31.5 bits (68), Expect = 0.22
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXP-XRPXRAXXPGRPS 910
PP P P PP P + P A PP P P P + A RPS
Sbjct: 173 PPAQPAAPVKSPPSAP-SLPSAVPPMPPKVPPPPLSQAPVANTSSRPS 219
Score = 29.5 bits (63), Expect = 0.91
Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPP---PXPPAXPXAAPPXAPP-HXPXPXRPXRAXXPGRPSRXGXXS 928
P P P P PP P P+ P +P APP P P P +P+ S
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKS 183
Query: 929 NXXXXXXXXXXXXXXPRXPPP 991
P+ PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 29.1 bits (62), Expect = 1.2
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 2/82 (2%)
Frame = +2
Query: 791 PXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSRXGXXSNXXXXXXXXXXXXX 970
P S P P P P APP P P A P PS+ +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP-PSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 971 XPRXPP--PRHXXPXPXNAXPP 1030
P P P P P PP
Sbjct: 183 SPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 803 PPPXPPAXPXAAPPXAPP 856
PPP PPA AA APP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXP--XPXRPXRAXXPGRP 907
P P R P P P S PP PP+ P +APP P P P P P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 908 S 910
+
Sbjct: 461 A 461
Score = 35.9 bits (79), Expect = 0.010
Identities = 34/137 (24%), Positives = 38/137 (27%), Gaps = 4/137 (2%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPP---PXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXP-G 901
P P+ P PP PP P PPP + + PP PP P P A P G
Sbjct: 352 PLPPQGRSAP--PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP--ALPPLG 407
Query: 902 RPSRXGXXSNXXXXXXXXXXXXXXPRXPPPRHXXPXPXNAXPPTXHXXXXXXXXXXXXXP 1081
SR P PP P P P
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Query: 1082 XXXPXXPXPPPPTXXSP 1132
P P PPP +P
Sbjct: 468 PLPPAAPAPPPAPAPAP 484
Score = 35.9 bits (79), Expect = 0.010
Identities = 23/51 (45%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXP--PPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRP 907
P P PP P S P PP P P AAPP PP P P P A P P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMP-AAPP-LPPAAPAPP-PAPAPAPAAP 487
Score = 35.5 bits (78), Expect = 0.014
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPP 856
PP PP P S PP P+ APP PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 35.5 bits (78), Expect = 0.014
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 743 PRXXXXPRRPPXPPPXPXSXP--PPXPPAXPXAAPPXAPPHXPXPXRP 880
P P P PP P P PP PPA P APP AP P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP--APPPAP--APAPAAP 487
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 782 PPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSR 913
PP P S P PP + APP P P + P P R
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPR 273
Score = 31.9 bits (69), Expect = 0.17
Identities = 32/131 (24%), Positives = 37/131 (28%), Gaps = 9/131 (6%)
Frame = +2
Query: 770 PPXPPP---XPXSXP-PPXPPAXPXAAPPXAPP---HXPXPXRPXRA--XXPGRPSRXGX 922
PP PPP S P PP + P PP + P P P RA P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 923 XSNXXXXXXXXXXXXXXPRXPPPRHXXPXPXNAXPPTXHXXXXXXXXXXXXXPXXXPXXP 1102
S P P P P + PP+ P P P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Query: 1103 XPPPPTXXSPP 1135
P +PP
Sbjct: 458 PLPAGMPAAPP 468
Score = 30.3 bits (65), Expect = 0.52
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPPXA 850
P P P P PP P + P P P P A P A
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 29.5 bits (63), Expect = 0.91
Identities = 31/127 (24%), Positives = 37/127 (29%), Gaps = 8/127 (6%)
Frame = +3
Query: 780 PPPXPXRXPPPXPRXXXXXXXXXXXXTXQXXXA--PXEPXXXAGRPAXXXX----ATXPT 941
PP PPP PR + + P P GR A A+ +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 942 PXPAXTLQPXHLXXXXXXTRXPXPXTPXPQXXTXAPTLPXV--LLSRXPXXXPXXPXHPP 1115
P T P L + P P AP LP + P P P PP
Sbjct: 414 TPPVPT--PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Query: 1116 RPXXPPP 1136
PPP
Sbjct: 472 AAPAPPP 478
Score = 29.1 bits (62), Expect = 1.2
Identities = 31/137 (22%), Positives = 36/137 (26%), Gaps = 9/137 (6%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXPPAX--PXAAPPXAPPHXPXPXRPXRA-XXPGR 904
P P R P P PPP PP ++PP +PP P A +
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 905 PSRXGXXSNXXXXXXXXXXXXXXPRXPPPRHXXPXP------XNAXPPTXHXXXXXXXXX 1066
P S P PP R P N+ P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 1067 XXXXPXXXPXXPXPPPP 1117
P P PPPP
Sbjct: 350 SIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +2
Query: 725 AXXPXQPRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPP 856
A P P PP PP P + P + PP PP
Sbjct: 252 APPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = -2
Query: 821 PGXXGGGAXGXGGGGXGXGGVXGGXGVGXG 732
PG GGG G GGG G GG GG G G G
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 35.1 bits (77), Expect = 0.018
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -2
Query: 821 PGXXGGGAXGXGGGGXGXGGVXGGXGVGXG 732
PG GG G GGG G GG GG G G G
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 35.1 bits (77), Expect = 0.018
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 821 PGXXGGGAXGXGGGGXGXGGVXGGXG 744
PG GGG G GGG G GG GG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 828 GXAGGXGGGXEXGXGGGXGGRRG 760
G GG GGG G GGG GG G
Sbjct: 249 GGLGGFGGGP-GGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 818 GXXGGGAXGXGGGGXGXGG 762
G GGG G GGG G GG
Sbjct: 252 GGFGGGPGGFGGGPGGHGG 270
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 818 GXXGGGAXGXGGGGXGXGGVXGGXG 744
G GGG G GGG G GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFG 208
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXP 871
P P PPP P PP PP P A PP P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.3 bits (70), Expect = 0.13
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXP 871
P PP PP + PPP PP P + + + P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 31.5 bits (68), Expect = 0.22
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Frame = +2
Query: 770 PPXPP----PXPXSXPPPXPPAXPXAAPPXAPPHXP 865
PP PP P P P P PP P P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.69
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 779 PPPXPXSXPPPXPPAXPXAAPPXAP--PHXPXPXRPXRAXXPGRP 907
PPP P + P P P PP AP P P P G P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 29.5 bits (63), Expect = 0.91
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +2
Query: 767 RPPXPPPXPXSXPPPXP---PAXPXAAPPXAPPHXPXPXRPXRAXXPGRP 907
+ P PPP P P P P P A PP P P A P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.074
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPPPXPPAXP 829
P PP PPP P PP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 791 PXSXPPPXPPAXPXAAPPXAPPHXPXP 871
P PPP PP P PP PP P P
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.91
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = +2
Query: 770 PPXPPP--XPXSXPPPXPP 820
PP PPP P S PPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 782 PPXPXSXPPPXPPAXPXAAPPXAPP 856
PP PPP P P + PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPP 844
PP PP P P PP+ P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.074
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 828 GXAGGXGGGXEXGXGGGXGGRRGXWXXRG 742
G GG GGG GGG GG RG RG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 32.7 bits (71), Expect = 0.097
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -1
Query: 888 ARXGRXXXXXXXXXXXXXAXGXAGGXGGGXEXGXGGGXGGRRGXWXXRGWXG 733
+R GR G GG GG G GG GGR G RG G
Sbjct: 7 SRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 31.1 bits (67), Expect = 0.30
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 818 GXXGGGAXGXGGGGXGXGGVXGGXGVGXG 732
G GGG G GG G GG GG G G
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 28.3 bits (60), Expect = 2.1
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -3
Query: 1135 GGGXXGRGGWXGXXGXXXGXR-ERRTXGSVGAXVXXWGXGVXGXGXRVAGGGXARXXG 965
GG GRGG+ G G G R R G GA G G G + GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 818 GXXGGGAXGXGGGGXGXGGVXGGXGV 741
G GG G GG G GG GG V
Sbjct: 48 GGRGGARGGRGGSSGGRGGAKGGAKV 73
Score = 27.1 bits (57), Expect = 4.8
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = -1
Query: 912 RDGRPGXXARXGRXXXXXXXXXXXXXAXGXAGGXGGGXEXGXGG---GXGGRRGXWXXRG 742
R GR G +R GR G GG GG G GG GGR G RG
Sbjct: 8 RGGRGG--SRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 767 RPPXPPPXPXSXPPPXPPAXPXAAP-PXAPPHXPXPXRPXRAXXPGRPS 910
+PP P P + PPA P A P AP P P P RP+
Sbjct: 516 QPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPA 564
Score = 31.1 bits (67), Expect = 0.30
Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 9/68 (13%)
Frame = +2
Query: 734 PXQPRXXXXPRRP--PXPPPXPXSXPPPXPPAXPXA----APPXAP--PHXP-XPXRPXR 886
P P P+ P P P P PP P P A PP AP P P P RP
Sbjct: 566 PVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAV 625
Query: 887 AXXPGRPS 910
P PS
Sbjct: 626 PVVPEAPS 633
Score = 30.3 bits (65), Expect = 0.52
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAP-PXAPPHXPXPXRPXRAXXPGRPS 910
P P P+ PP P P + P PP P A P P P P P P+
Sbjct: 581 PVAPEVPSVPQ-PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPA 639
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +2
Query: 734 PXQPRXXXXPRRP--PXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRP 907
P +P P P P PP P P P P A P P P P P P
Sbjct: 620 PQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRP--AVPVVPEAPSVPQPPAAPVVPEVP 677
Query: 908 S 910
S
Sbjct: 678 S 678
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.52
Identities = 28/123 (22%), Positives = 30/123 (24%), Gaps = 1/123 (0%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSRXGXXSNXXXXXX 949
PP P P P P A PP P P P + P P+ G
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 950 XXXXXXXXPRXPPPRHXXPXPXNAXP-PTXHXXXXXXXXXXXXXPXXXPXXPXPPPPTXX 1126
PP P P A P P P P PP P
Sbjct: 1101 APPVPKPSVAVPP----VPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 1127 SPP 1135
P
Sbjct: 1157 GAP 1159
Score = 30.3 bits (65), Expect = 0.52
Identities = 29/123 (23%), Positives = 34/123 (27%), Gaps = 4/123 (3%)
Frame = +2
Query: 779 PPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRP----SRXGXXSNXXXXX 946
P P P PP P P APP P P P + P P + +
Sbjct: 1122 PVPKPSVAAPPVP--VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Query: 947 XXXXXXXXXPRXPPPRHXXPXPXNAXPPTXHXXXXXXXXXXXXXPXXXPXXPXPPPPTXX 1126
P PPP P P P+ P P P PT
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVP----KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 1127 SPP 1135
+PP
Sbjct: 1236 APP 1238
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 782 PPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRP 880
P P S PPP P + ++P PP P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXP 871
PP PPP P P PP P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPPPXPPAXPXAAPP-XAPPHXPXPXRPXRAXXP 898
P P+ P P P P S P P P APP AP P +P A P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIP--APSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 27.9 bits (59), Expect = 2.8
Identities = 28/121 (23%), Positives = 31/121 (25%), Gaps = 2/121 (1%)
Frame = +2
Query: 779 PPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSRXGXXSNXXXXXXXXX 958
P P P + PP P P APP P P + P P S+
Sbjct: 1023 PVPLPSADAPPIP--VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 959 XXXXXPRXPPPRHXXPXPXNAXPPT--XHXXXXXXXXXXXXXPXXXPXXPXPPPPTXXSP 1132
P P P P A PP P P PP P
Sbjct: 1081 GAPPVP-APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 1133 P 1135
P
Sbjct: 1140 P 1140
Score = 27.5 bits (58), Expect = 3.7
Identities = 29/122 (23%), Positives = 33/122 (27%), Gaps = 3/122 (2%)
Frame = +2
Query: 779 PPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSRXGXXSNXXXXXXXXX 958
P P P PP P P APP P P P + P P S
Sbjct: 1103 PVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPSGAPPVPK----PSVAAPPVPAPS 1156
Query: 959 XXXXXPRXPPPRHXXPXPXNAXPPTXH--XXXXXXXXXXXXXPXXXPXXPXPP-PPTXXS 1129
P+ P P + PP P P PP PP +
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 1130 PP 1135
PP
Sbjct: 1217 PP 1218
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +2
Query: 764 RRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXP 865
+ PP P P + P P P P P + P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 26.6 bits (56), Expect = 6.4
Identities = 24/104 (23%), Positives = 32/104 (30%), Gaps = 1/104 (0%)
Frame = +3
Query: 750 PXXXPAXPXTPPPXPXRXPPPXPRXXXXXXXXXXXXTXQXXXAPXEPXXXAGRPAXXXXA 929
P P+ P P P PP P+ AP P G P +
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPK-----PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 930 T-XPTPXPAXTLQPXHLXXXXXXTRXPXPXTPXPQXXTXAPTLP 1058
T P P P+ L P + P P + P T ++P
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPP-VPAPSSEAPSVSTPRSSVP 1257
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +2
Query: 761 PRRPPXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXPGRPSRXG 919
P+ PP P P P AAPP P P P P+ G
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 6/46 (13%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPX------AAPPXAPPHXPXPXRPXRA 889
PP P P + P P P P AAPP P P P A
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAX--PXAAPPXAPPHXPXP 871
PP P P P P P A P P APP P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP-VPKP 1203
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.91
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 803 PPPXPPAXPXAAPPXAPPHXPXP 871
PPP P A P A PP A P P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALP 1905
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPP 856
PP PPP P A A PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 770 PPXPPPXPXSXPPPXPPAXPXAAPPXAPP 856
PP P P P P PP + P PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 734 PXQPRXXXXPRRPPXPPPXPXSXPP 808
P + R PR PP PPP PP
Sbjct: 214 PPKFRHKKVPRGPPSPPPPVLHSPP 238
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 785 PXPXSXPPPXPPAXPXAAPPXAPP 856
P P P P P P A PP PP
Sbjct: 164 PNPAMPPIPFLPFNPAAQPPFPPP 187
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/47 (29%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Frame = +2
Query: 761 PRRP-PXPPPXPXSXPPPXPPAXPXAAPPXAPPHXPXPXRPXRAXXP 898
P P P PP P P P P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,293,828
Number of Sequences: 5004
Number of extensions: 15102
Number of successful extensions: 481
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 605623328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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