Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_E17
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 165 1e-41
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 138 7e-34
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 75 1e-14
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 75 1e-14
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 70 4e-13
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 68 2e-12
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 68 2e-12
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 67 4e-12
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 64 2e-11
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 64 2e-11
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 63 4e-11
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 63 6e-11
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 63 6e-11
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 57 3e-09
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 56 7e-09
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 55 2e-08
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 54 2e-08
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 52 1e-07
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 51 3e-07
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 50 6e-07
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 48 2e-06
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 46 7e-06
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 39 0.001
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 30 0.50
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 29 0.88
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 2.7
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 3.5
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 4.7
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 26 6.2
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 26 8.2
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 165 bits (400), Expect = 1e-41
Identities = 75/110 (68%), Positives = 92/110 (83%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LGD +N +CHACIGG VR+D+ L++GVHVVVGTPGRV+DMI RRAL + +++FVLDE
Sbjct: 110 LGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDE 169
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEMLSRGFKDQI+D+FQ+L QV+LLSATMP DVL V+ FMRDP+R
Sbjct: 170 ADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIR 219
Score = 102 bits (244), Expect = 8e-23
Identities = 48/55 (87%), Positives = 55/55 (100%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
RDV+AQAQSGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALG
Sbjct: 57 RDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALG 111
Score = 80.2 bits (189), Expect = 4e-16
Identities = 33/50 (66%), Positives = 44/50 (88%)
Frame = +3
Query: 231 MDPGTLDTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCI 380
++ ++T++D+V++TFDDMNLK ELLRG YAYGFE+PSAIQQRAIMP +
Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPIL 54
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 138 bits (335), Expect = 7e-34
Identities = 60/110 (54%), Positives = 84/110 (76%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LGDH+N +CHACIGG +V DI++L+ G HVV GTPGRV DMI RR L +K+ +LDE
Sbjct: 112 LGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDE 171
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADE+L++GFK+QI+D+++ L QV+++SAT+P DVL ++ F +PVR
Sbjct: 172 ADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVR 221
Score = 91.9 bits (218), Expect = 1e-19
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +1
Query: 382 KXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
K RDVIAQAQSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QIQ VV+ALG
Sbjct: 57 KGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALG 113
Score = 57.6 bits (133), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 MDPGTLDTDWD-QVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
M+ L T D V +F++MNLKE+LLRG YAYG+E PSA+Q RAI+ +G
Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKG 58
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 75.4 bits (177), Expect = 1e-14
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG H+N K GG +R+DI +L VH+VVGTPGRV D+ + + FV+DE
Sbjct: 135 LGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDE 194
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMP 829
AD++LS F I + + Q+ L SAT P
Sbjct: 195 ADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFP 228
Score = 61.7 bits (143), Expect = 1e-10
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
+A RD++A+A++GTGKTA F I L+++DT + Q LIL PTRELA Q +V LG
Sbjct: 77 IALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLG 136
Score = 43.2 bits (97), Expect = 5e-05
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 156 MSEXWPEXSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGXY 323
M+E + +N D+ S+ G P + + V +T F+D LK ELL G +
Sbjct: 1 MAESLIQKLENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIF 60
Query: 324 AYGFEKPSAIQQRAIMPCIQG 386
GFE+PS IQ+ +I + G
Sbjct: 61 EAGFERPSPIQEESIPIALSG 81
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 75.4 bits (177), Expect = 1e-14
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Frame = +2
Query: 578 ACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 757
A GG ++R IRQ++ G ++ TPGR+ D+I R + IK VLDEAD ML GF+
Sbjct: 288 AVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFE 347
Query: 758 DQIHDVFQ---MLSADV-QVILLSATMPDDVLXVSXCFMRDPV 874
QI + + M S + Q ++ SAT P D+ ++ F++D V
Sbjct: 348 PQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYV 390
Score = 29.9 bits (64), Expect = 0.50
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 18/72 (25%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISIL--------------QQIDTSIRECQA----LIL 498
+ + RD++A AQ+G+GKTA F IL Q R +A LIL
Sbjct: 202 IVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLIL 261
Query: 499 APTRELAQQIQK 534
APTREL QI +
Sbjct: 262 APTRELVCQIHE 273
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 70.1 bits (164), Expect = 4e-13
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +2
Query: 575 HACI-GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG 751
+ C+ GG IR L GV + + TPGR+ DM+ + + VLDEAD ML G
Sbjct: 226 NTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMG 285
Query: 752 FKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
F+ QI + + D Q ++ SAT P +V ++ ++ D ++
Sbjct: 286 FEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQ 327
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 537
+A RD++ + +G+GKT ++ + + I+ L+LAPTRELA QIQ+
Sbjct: 155 MAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQE 214
Query: 538 VIALG*SLEC*MPCLH 585
G S C++
Sbjct: 215 CTKFGKSSRIRNTCVY 230
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 270 VETFDDMNLKEELLRGXYAYGFEKPSAIQQRA 365
V TF++ +L+ GFE P+ IQQ+A
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 68.1 bits (159), Expect = 2e-12
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Frame = +2
Query: 587 GGXNVREDIRQLES---GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGF 754
GG N+++D+ + H+VV TPGR+ ++ + L N++K FVLDE D++L S
Sbjct: 156 GGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDM 215
Query: 755 KDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ I +VF+ QV++ SAT+ +++ + FM++P+
Sbjct: 216 RRDIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPL 255
Score = 50.4 bits (115), Expect = 3e-07
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 531
DV+ QA+SG GKTA F +S LQQI+ E L+L TRELA QI+
Sbjct: 90 DVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIK 136
Score = 34.3 bits (75), Expect = 0.023
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +3
Query: 279 FDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQGT 389
F D LK ELLR GFE PS +QQ I I GT
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGT 89
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = +2
Query: 581 CIGGXNVREDIRQLESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFK 757
CIGG +++ ++L +V+ TPGR D M + I++ V+DEAD ML GF
Sbjct: 364 CIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFA 423
Query: 758 DQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
D+++++ Q Q +L SATM D V + + PVR
Sbjct: 424 DELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVR 463
Score = 44.0 bits (99), Expect = 3e-05
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVI 543
LA +D++ A +G+GKTA F + IL+++ + + LIL PTRELA Q V
Sbjct: 292 LALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVAT 351
Query: 544 ALG*SLEC*MPCL 582
+ S M CL
Sbjct: 352 KIA-SFTDIMVCL 363
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 276 TFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYFL 440
+F MNL +L+G GFE P+ IQ + I + G ++ + K F+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFI 314
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 66.9 bits (156), Expect = 4e-12
Identities = 30/60 (50%), Positives = 47/60 (78%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
L++ R++I Q+QSGTGKTA F++++L ++D S+ + QA+ LAP+RELA+QI VV +G
Sbjct: 149 LSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMG 208
Score = 63.7 bits (148), Expect = 3e-11
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 638 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFQMLSADVQVILL 814
+V+GTPG V D++ RR L A IK+FVLDEAD ML +G DQ + +L + Q++L
Sbjct: 233 IVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLF 292
Query: 815 SATMPDDV 838
SAT + V
Sbjct: 293 SATFSERV 300
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +3
Query: 270 VETFDDMNLKEELLRGXYAYGFEKPSAIQQRAI 368
V++F+++ LK ELL+G Y+ F+KPS IQ++A+
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKAL 145
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 64.5 bits (150), Expect = 2e-11
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 560 LNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEA 730
LN + GG +++ I L+ G +VV TPGR+ D+++ R + + VLDEA
Sbjct: 518 LNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEA 577
Query: 731 DEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
D M GF+ Q+ + + D Q +L SAT P + ++ ++ PV
Sbjct: 578 DRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPV 625
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQI 528
RDVI A++G+GKT F + + + I ++ + A+I+ PTRELA QI
Sbjct: 456 RDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQI 507
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 64.5 bits (150), Expect = 2e-11
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 563 NAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 742
N K GG E R ++ V++GTPGR+ D+I ++ + + VLDEAD ML
Sbjct: 264 NLKAVVVYGGAPKSEQARAAKNA-SVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRML 322
Query: 743 SRGFKDQIHDVFQ-----MLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
GF+ I ++ + Q + SAT P+ V ++ F++DPV+
Sbjct: 323 DTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVK 372
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQ 525
RDV+ A++G+GKT F I LQ ++ + + L+++PTRELA Q
Sbjct: 203 RDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQ 251
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.3 bits (147), Expect = 4e-11
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = +2
Query: 578 ACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 757
A +GG ++ E L +VV TPGR + L ++I+ V DEAD + GF
Sbjct: 172 AIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFA 231
Query: 758 DQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
Q+ ++ L Q +L SAT+P ++ + ++DPV
Sbjct: 232 AQLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPV 270
Score = 48.4 bits (110), Expect = 1e-06
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRELAQQIQKVV 540
L + RDV+ A++G+GKTA F I +++ + +++ +ALIL+P RELA Q KVV
Sbjct: 102 LLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVV 159
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 279 FDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
F M L + LLR + GF+ P+ IQ++ I ++G
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEG 106
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 62.9 bits (146), Expect = 6e-11
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHA----NTIKLF 715
LG +LN K +GG ++ L HVVV TPGR+ D+I IK
Sbjct: 98 LGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFL 157
Query: 716 VLDEADEMLSRGFKDQIHDVFQML--SADVQVILLSATMPDDV 838
V+DEAD +LS F D + D F +L S D Q +L +AT+ D +
Sbjct: 158 VMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTDAI 200
Score = 47.2 bits (107), Expect = 3e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG*SL 561
R+ I A++G+GKTA F++ I+++ ALIL PTRELA QI + ALG +L
Sbjct: 45 RNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANL 102
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 62.9 bits (146), Expect = 6e-11
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Frame = +2
Query: 560 LNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 739
L +C + +GG E Q+ G H+VV TPGR+ D + RR + V+DEAD M
Sbjct: 352 LGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRM 411
Query: 740 LSRGFKDQIHDVFQML-------------------SADVQVILLSATMPDDVLXVSXCFM 862
L GF+D ++ + L S+ Q I+ SAT+P V ++ ++
Sbjct: 412 LDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYL 471
Query: 863 RDPV 874
+PV
Sbjct: 472 IEPV 475
Score = 39.9 bits (89), Expect = 5e-04
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDT--SIRECQ------ALILAPTRELAQQIQ 531
+D+I A++G+GKTA F I ++ I + E A++LAPTRELAQQIQ
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQ 342
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 57.2 bits (132), Expect = 3e-09
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +2
Query: 584 IGGXNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKD 760
IGG N R + +L GV+++V TPGR+ D + + ++ V+DEAD +L GF+D
Sbjct: 196 IGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFED 255
Query: 761 QIHDVFQML-SADVQVILLSATMPDDV 838
++ + ++L S + Q +L SAT V
Sbjct: 256 EMRQIMKILPSENRQTLLFSATQTTKV 282
Score = 34.7 bits (76), Expect = 0.018
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQI 528
RDV+ A++G+GKT F +I +L + R +I++PTRELA QI
Sbjct: 127 RDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQI 177
Score = 34.3 bits (75), Expect = 0.023
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 270 VETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQGTRCYRSSPVRNWKNCYFL 440
+E F D+ L E + + GFE + IQ+R+I P + G ++ + K FL
Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFL 144
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 56.0 bits (129), Expect = 7e-09
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 557 HLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEAD 733
H C+ IGG + + ++ GV++++GTPGR+ D + AL + ++ VLDE D
Sbjct: 246 HWIVSCNV-IGGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEGD 304
Query: 734 EMLSRGFKDQIHDVFQMLSADVQVILLSATMPD-DVLXVSXCFMRDPVR 877
++ GF++ + + L + +I ++P V + M+D V+
Sbjct: 305 RLMDMGFEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVK 353
Score = 42.3 bits (95), Expect = 9e-05
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 531
L + +D +AQ+G+GKT + + I+Q++ T A+I+APTREL QQI
Sbjct: 174 LNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIY 233
Query: 532 KVVIALG*SLEC*MPCLHWWXQC 600
V L + P HW C
Sbjct: 234 NVANKLNNN-----PLSHWIVSC 251
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG*SL 561
RDVI AQ+G+GKTA F++ ++Q++ + A++LAPTRELA QI + A+G S+
Sbjct: 84 RDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSI 141
Score = 53.6 bits (123), Expect = 4e-08
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLD 724
+G + + +GG ++ L HV+V TPGR+ D + + +K ++D
Sbjct: 137 IGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMD 196
Query: 725 EADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
EAD +L F I + +++ + + +L SATM V + + PVR
Sbjct: 197 EADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVR 247
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 249 DTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAI 368
D+ ++ +TF ++ + +EL GF+ P+ IQQ AI
Sbjct: 38 DSQNNEAPKTFKELGVIDELCEACEKLGFKTPTPIQQEAI 77
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 54.4 bits (125), Expect = 2e-08
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 6/62 (9%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILAPTRELAQQIQK 534
LA + +D++AQA++G+GKTA + I IL+ QID + R AL+L PTRELAQQ+
Sbjct: 47 LALEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYN 106
Query: 535 VV 540
V+
Sbjct: 107 VL 108
Score = 46.8 bits (106), Expect = 4e-06
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +2
Query: 638 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLSADVQVILLS 817
+V+ TP R + L + +K V+DEAD MLS G+ + + + + L Q L+S
Sbjct: 143 IVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMS 202
Query: 818 ATMPDDVLXVSXCFMRDP 871
AT+ ++ + R+P
Sbjct: 203 ATLSKNIASLQKLVCRNP 220
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 273 ETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
+TF D NL L R + FEKP+++Q I ++G
Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEG 51
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 52.0 bits (119), Expect = 1e-07
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 584 IGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKD 760
IGG N +E+ +L S ++++V TPGR+ I + + +++ +LDEAD +L GF+
Sbjct: 146 IGGNNYKEEKERL-SRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRT 204
Query: 761 QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDP 871
+ + L Q +L SAT V ++ +++P
Sbjct: 205 TLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNP 241
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Frame = +1
Query: 376 ASKXRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVI 543
A K RD++ A++G+GKT F + +++ + TS+ AL+++PTRELA Q + ++
Sbjct: 73 ALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLV 132
Query: 544 ALG 552
+G
Sbjct: 133 KIG 135
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 50.8 bits (116), Expect = 3e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = +2
Query: 563 NAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHAN--TIKLFVLDEADE 736
N + + GG V++ R L HVVV TPGR++ +I L N IK VLDEAD
Sbjct: 220 NIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADR 279
Query: 737 MLSRGFKDQIHDVFQMLSADV----QVILLSATMPD 832
+L + +++ + ++L + Q + SAT +
Sbjct: 280 LLQKSHFEELSKLLEILGNPMHTQRQTFIFSATFDE 315
Score = 46.8 bits (106), Expect = 4e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 376 ASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQI 528
AS D+I +A +G+GKT F I IL+ + + QAL++APTRELA QI
Sbjct: 156 ASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQI 208
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 49.6 bits (113), Expect = 6e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 623 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLSADVQ 802
E VV+GTPGR+ +M++ + + +++ +LDEAD ++ GF+ + + L +
Sbjct: 130 EKNPSVVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRR 187
Query: 803 VILLSATMPDDV 838
L SATM D V
Sbjct: 188 TGLFSATMNDTV 199
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 382 KXRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKV 537
K +D++ +A +G+GKT + + ++ DT ALI+APTRELA QI V
Sbjct: 37 KNKDLVVEAVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNV 91
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 47.6 bits (108), Expect = 2e-06
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 575 HACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRG 751
+A G +RE+ ++++ TPGR+ D + R L + + F+LDEAD ++ G
Sbjct: 145 YAIGGNSKMREENAIRRGNANLLIATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMG 204
Query: 752 FKDQIHDVFQ-MLSADVQVILLSATMPDDVLXV 847
F + I ++ + + + + + SATMP V V
Sbjct: 205 FAESILNIHEAVTTTKTRKLCFSATMPPKVSNV 237
Score = 33.1 bits (72), Expect = 0.054
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQI 528
+ + QA++GTGKT F + + + + + ++IL+PTRELA QI
Sbjct: 78 NAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQI 128
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 46.0 bits (104), Expect = 7e-06
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 599 VREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI-HDV 775
++E +L + +GTP R+ I + L ++ FV+DEAD + GF +Q H +
Sbjct: 156 IQEKAPKLREKYDMCIGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQTDHIL 214
Query: 776 FQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
S+++ L SAT+P V ++ DP+R
Sbjct: 215 SACTSSNICKSLFSATIPSRVEELAKVVTVDPIR 248
Score = 42.3 bits (95), Expect = 9e-05
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSI-RECQALILAPTRELAQQIQK 534
RD++A A +G+GKT + ILQ++ + +A+I+APTREL +QI +
Sbjct: 84 RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYR 133
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 623 ESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLS 790
E + V+V TPGR+ D I + ++ V+DEAD +L + F+D + V +S
Sbjct: 258 ECRIDVLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQK 534
DV A +G+GKT ++ I I+Q + ++ + +++ PTREL Q+ K
Sbjct: 175 DVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAK 223
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 29.9 bits (64), Expect = 0.50
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 572 CHACIGGXNVREDIRQLE-SGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 739
C I G N R + +L S + ++ + + R + A+T K+ +LDEAD M
Sbjct: 76 CARKIYGPNYRNQLMELNASDDRGIDAVREQIKNFASTRQIFASTFKMIILDEADAM 132
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 29.1 bits (62), Expect = 0.88
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 394 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 543
VI + +GK+ + I ILQ + + A + PT+ LAQ +K +I
Sbjct: 329 VIVSTSTSSGKSLIYQIPILQSL-LEDNQSTAFFVFPTKSLAQDQKKSLI 377
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 415 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 531
G G T F+ SILQQI + SI +C + +P R + ++IQ
Sbjct: 89 GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 447 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 548
D+ TNR + SSFD S P+N++G ++
Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 220 DLREWTLGHLTPT 258
DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 731 DEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVL 841
+EMLS +H V+ S + + LS+T P+ +L
Sbjct: 299 EEMLSPSSLYTLHQVYTATSESINIKTLSSTTPEYIL 335
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 243 TLDTDWDQVVETFDDMNLKEELLRGXYAYGF 335
T D WD E FDD N + +G + F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,646,838
Number of Sequences: 5004
Number of extensions: 78395
Number of successful extensions: 285
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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