Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_E17
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 153 1e-37
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 153 1e-37
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 149 3e-36
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 149 3e-36
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 99 4e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 89 5e-18
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 76 4e-14
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 74 2e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 74 2e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 72 5e-13
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 69 6e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 66 4e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 65 7e-11
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 62 7e-10
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 62 7e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 61 1e-09
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 61 1e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 61 1e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 61 1e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 61 1e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 60 2e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 60 2e-09
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 59 4e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 54 1e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 2e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 2e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 2e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 52 5e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 50 3e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 49 5e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 49 5e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 49 5e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 9e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 9e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 2e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 2e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 41 0.001
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.12
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.20
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 30 1.9
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.8
U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 153 bits (372), Expect = 1e-37
Identities = 72/110 (65%), Positives = 90/110 (81%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG++LN CIGG +VR+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDE
Sbjct: 120 LGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL V+ FMR+P+R
Sbjct: 180 ADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIR 229
Score = 85.4 bits (202), Expect = 5e-17
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG*SLEC 567
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG L
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 568 -*MPCL 582
+PC+
Sbjct: 127 NILPCI 132
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 240 GTLDTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
G ++ ++DQVVE+FDDM LKEELLRG Y +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 153 bits (372), Expect = 1e-37
Identities = 72/110 (65%), Positives = 90/110 (81%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG++LN CIGG +VR+D R+LE+G+HVVVGTPGRV DMI R AL + IK+FVLDE
Sbjct: 120 LGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDE 179
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEMLSRGFKDQI++VF+ + DVQV+LLSATMP +VL V+ FMR+P+R
Sbjct: 180 ADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIR 229
Score = 85.4 bits (202), Expect = 5e-17
Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG*SLEC 567
+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG L
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNV 126
Query: 568 -*MPCL 582
+PC+
Sbjct: 127 NILPCI 132
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +3
Query: 240 GTLDTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
G ++ ++DQVVE+FDDM LKEELLRG Y +GFEKPSAIQ+RAI+PC G
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTG 66
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 149 bits (360), Expect = 3e-36
Identities = 65/110 (59%), Positives = 87/110 (79%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LGD++N +CHACIGG N+ EDIR+L+ G HVV GTPGRV+DMI RR L IKL VLDE
Sbjct: 117 LGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDE 176
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEML++GFK+Q++D+++ L QV+LLSAT+P ++L ++ FM DP+R
Sbjct: 177 ADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIR 226
Score = 96.3 bits (229), Expect = 3e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 382 KXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 267 VVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQGTR 392
V+ TFD M L+E+LLRG YAYGFEKPSAIQQRA+ P I R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV-PAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 149 bits (360), Expect = 3e-36
Identities = 65/110 (59%), Positives = 87/110 (79%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LGD++N +CHACIGG N+ EDIR+L+ G HVV GTPGRV+DMI RR L IKL VLDE
Sbjct: 117 LGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDE 176
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEML++GFK+Q++D+++ L QV+LLSAT+P ++L ++ FM DP+R
Sbjct: 177 ADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIR 226
Score = 96.3 bits (229), Expect = 3e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +1
Query: 382 KXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
K RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +3
Query: 267 VVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQGTR 392
++ TFD M L+E+LLRG YAYGFEKPSAIQQRAI P I R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI-PAILKAR 64
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 99.1 bits (236), Expect = 4e-21
Identities = 54/110 (49%), Positives = 73/110 (66%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG +LN C+G E+ + HV++GTP D ++ + IK+FVLDE
Sbjct: 87 LGRNLNVNA-TCLGFDTTAEN----DKISHVLMGTPK---DFLSNIPSDTSRIKMFVLDE 138
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
ADEMLS+GFKDQI++VF+ + DVQV+LLSATMP +VL V+ FMRDP+R
Sbjct: 139 ADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIR 188
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 288 MNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
M LKEELLRG Y +GFEKPSAIQ+ A+ PC G
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG 33
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/79 (37%), Positives = 42/79 (53%)
Frame = +1
Query: 346 LQSSNAQ*CLASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 525
+Q S C K DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+
Sbjct: 22 IQKSAVAPCTTGK--DVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQR 79
Query: 526 IQKVVIALG*SLEC*MPCL 582
+ + +LG +L CL
Sbjct: 80 AHEQLKSLGRNLNVNATCL 98
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 88.6 bits (210), Expect = 5e-18
Identities = 38/98 (38%), Positives = 58/98 (59%)
Frame = +2
Query: 581 CIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKD 760
CIGG + E + + G+H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D
Sbjct: 306 CIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFED 365
Query: 761 QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+I +F A Q +L SATMP + + + P+
Sbjct: 366 EIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPI 403
Score = 35.1 bits (77), Expect = 0.067
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQI 528
+A RD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 223 VALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Query: 529 QKVVIAL 549
++I +
Sbjct: 283 FDLIIEM 289
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 75.8 bits (178), Expect = 4e-14
Identities = 38/108 (35%), Positives = 58/108 (53%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
L H+ K GG ++R+DI +L VH+V+ TPGR+ D++ + K VLDE
Sbjct: 134 LSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDE 193
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDP 871
AD++LS+ F+ + + L + QV+L SAT P+ V M P
Sbjct: 194 ADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTVTSFMQKHMHKP 241
Score = 55.2 bits (127), Expect = 6e-08
Identities = 21/59 (35%), Positives = 42/59 (71%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 549
+A +D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L
Sbjct: 76 VALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVEL 134
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 279 FDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
F+D L +LL G + G+EKPS IQ+ +I + G
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTG 80
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 73.7 bits (173), Expect = 2e-13
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRR----ALHANTIKLF 715
LG + KC +GG ++ R+L HVVV TPGR+ D+I A I+ F
Sbjct: 180 LGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFF 239
Query: 716 VLDEADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDP 871
VLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++ + R P
Sbjct: 240 VLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKP 291
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALG 181
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 73.7 bits (173), Expect = 2e-13
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRR----ALHANTIKLF 715
LG + KC +GG ++ R+L HVVV TPGR+ D+I A I+ F
Sbjct: 180 LGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFF 239
Query: 716 VLDEADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDP 871
VLDEAD ML + DQ+ +F+ +S Q +LLSAT+ +++ + R P
Sbjct: 240 VLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHRVSTRKP 291
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALG 181
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/103 (35%), Positives = 51/103 (49%)
Frame = +2
Query: 560 LNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 739
L K GG + R LE GV +VV TPGR+ D + + VLDEAD M
Sbjct: 229 LGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRM 288
Query: 740 LSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRD 868
L GF+ QI + + D Q ++ SAT P +V ++ F +D
Sbjct: 289 LDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKD 331
Score = 48.0 bits (109), Expect = 9e-06
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKV 537
+A RD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V
Sbjct: 162 IAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEV 221
Query: 538 VIALG*SLEC*MPCL 582
I SL M CL
Sbjct: 222 SIDFCHSLGLKMTCL 236
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 68.5 bits (160), Expect = 6e-12
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRA-LHANTIKLFVLD 724
+G H C IGG +V + ++ SG++++V TPGR+ + A + +++++ VLD
Sbjct: 171 VGAHHGFSCGLVIGGSDVAFERNRI-SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLD 229
Query: 725 EADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
EAD ML GF Q++ + L A+ Q +L SAT +V + DPV
Sbjct: 230 EADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDLCRVCTNDPV 279
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIALG 552
DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A+G
Sbjct: 115 DVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVG 172
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/109 (26%), Positives = 54/109 (49%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG +C +GG + E + +++ TPGR+ +I L + ++ V DE
Sbjct: 116 LGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDE 175
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
AD + GF+DQ+ + + + Q +L SAT+P ++ + + DP+
Sbjct: 176 ADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPM 224
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALG 552
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/109 (26%), Positives = 54/109 (49%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDE 727
LG +C +GG + E + +++ TPGR+ +I L + ++ V DE
Sbjct: 116 LGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDE 175
Query: 728 ADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
AD + GF+DQ+ + + + Q +L SAT+P ++ + + DP+
Sbjct: 176 ADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLVDFAKAGLTDPM 224
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALG 552
+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELG 117
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +2
Query: 587 GGXNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKD 760
GG +++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ +
Sbjct: 146 GGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRR 205
Query: 761 QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ ++ +M QV++ SAT+P ++ V FM+DP+
Sbjct: 206 DVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPM 243
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 534
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 64.9 bits (151), Expect = 7e-11
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +2
Query: 560 LNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR---RALHANTIKLFVLDEA 730
L K GG + E I L+ G +VV TPGR+ D++ + + + VLDEA
Sbjct: 404 LGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEA 463
Query: 731 DEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
D M +GF+ QI V + D Q +L SAT P + ++ + PV
Sbjct: 464 DRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPV 511
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQK 534
RDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYK 395
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +2
Query: 587 GGXNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKD 760
GG +++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ +
Sbjct: 146 GGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRR 205
Query: 761 QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRD 868
+ ++ +M QV++ SAT+P ++ V FM+D
Sbjct: 206 DVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQD 241
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 534
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 80 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 61.7 bits (143), Expect = 7e-10
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +2
Query: 596 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 775
N E+ LE HVVV TPG++ M + R + + V+DEAD +LS G+++++ +
Sbjct: 135 NEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 194
Query: 776 FQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
L Q ++ SAT+ DD+ + FM PV
Sbjct: 195 RSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPV 227
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 61.7 bits (143), Expect = 7e-10
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +2
Query: 596 NVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 775
N E+ LE HVVV TPG++ M + R + + V+DEAD +LS G+++++ +
Sbjct: 202 NEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 261
Query: 776 FQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
L Q ++ SAT+ DD+ + FM PV
Sbjct: 262 RSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPV 294
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQ 531
LA + ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI
Sbjct: 122 LALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIY 180
Query: 532 KVVIALG*SL 561
K+ + L +L
Sbjct: 181 KLFVKLSQAL 190
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 237 PGTLDTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAI 368
P + D++ +TF D L E +L+ G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 587 GGXNVREDIRQLESGV-HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 763
GG +++D +L + H+VVGTPGR+ + L + +K FVLDE D+M+ G D
Sbjct: 145 GGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADM 202
Query: 764 IHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
DV ++ QV++ SAT+P ++ V FM+DP+
Sbjct: 203 RRDVQEI----KQVMMFSATLPKELRTVCKRFMQDPM 235
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 534
DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 79 DVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 126
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 766
G N ++ I +L G H+++ TPGR+ D++ + + + VLDEAD ML GF+ QI
Sbjct: 287 GRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQI 346
Query: 767 HDVFQ---MLSADVQV-ILLSATMPDDVLXVSXCFMRD 868
+ + M S + ++ + SAT P ++ ++ F+++
Sbjct: 347 RQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKE 384
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 16/63 (25%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTRELA 519
RD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 520 QQI 528
QI
Sbjct: 264 LQI 266
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 766
G N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI
Sbjct: 259 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 318
Query: 767 HDVF-QMLSADV--QVILLSATMPDDVLXVSXCFMRD 868
+ Q + + SAT P ++ ++ F++D
Sbjct: 319 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKD 355
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 15/64 (23%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 522
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 523 QIQK 534
QI K
Sbjct: 237 QIHK 240
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 766
G N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI
Sbjct: 243 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 302
Query: 767 HDVF-QMLSADV--QVILLSATMPDDVLXVSXCFMRD 868
+ Q + + SAT P ++ ++ F++D
Sbjct: 303 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKD 339
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 15/64 (23%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 522
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 523 QIQK 534
QI K
Sbjct: 221 QIHK 224
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 766
G N R+ + +L +G H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI
Sbjct: 240 GRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQI 299
Query: 767 HDVF-QMLSADV--QVILLSATMPDDVLXVSXCFMRD 868
+ Q + + SAT P ++ ++ F++D
Sbjct: 300 RKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKD 336
Score = 35.9 bits (79), Expect = 0.038
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 15/64 (23%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRELAQ 522
RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 523 QIQK 534
QI K
Sbjct: 218 QIHK 221
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 548 LGDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLD 724
LG + +GG ++ L H++V TPGR+ D + + + +K ++D
Sbjct: 135 LGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMD 194
Query: 725 EADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
EAD +L+ F+ ++ + +++ + + L SATM V + +RDP R
Sbjct: 195 EADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPAR 245
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +1
Query: 376 ASKXRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
A + +DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 78 ALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALG 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 249 DTDWDQVVETFDDMNLKEELLRGXYAYGFEKPSAIQQRAIMPCIQG 386
D + D ++F ++ + + L G+ KPS IQQ A+ +QG
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQG 81
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +2
Query: 566 AKCHACIGGXNVREDIRQL-ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 742
A+ +GG + ++ L ++ +V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
Query: 743 SRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRD 868
F+D I+ + L QV + SAT P ++ + F+RD
Sbjct: 178 DEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 540
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = +2
Query: 566 AKCHACIGGXNVREDIRQL-ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 742
A+ +GG + ++ L ++ +V+GTPGR+ ++ A++ + + FVLDEAD+++
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLM 177
Query: 743 SRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRD 868
F+D I+ + L QV + SAT P ++ + F+RD
Sbjct: 178 DEVFRDDINIIINSLPQIRQVAVFSATYPRNLDNLLSTFLRD 219
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 540
RD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V
Sbjct: 60 RDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETV 110
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 59.3 bits (137), Expect = 4e-09
Identities = 31/96 (32%), Positives = 49/96 (51%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 766
GG + E + GV +V+ TPGR+ D+ + ++ VLDEAD ML GF+ I
Sbjct: 198 GGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAI 257
Query: 767 HDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ + D V L SAT P+ V ++ + ++ V
Sbjct: 258 RRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAV 293
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 11/59 (18%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQIQ 531
+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQI+
Sbjct: 122 QDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/79 (36%), Positives = 42/79 (53%)
Frame = +2
Query: 551 GDHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEA 730
G L K + IGG + + +L GV VV+ TPGR+ D++ R L N +LDEA
Sbjct: 402 GKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEA 461
Query: 731 DEMLSRGFKDQIHDVFQML 787
D ML GF+ + V + +
Sbjct: 462 DRMLDMGFEPDVQKVLEYM 480
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 10/59 (16%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQIQK 534
RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEE 396
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +2
Query: 587 GGXNVREDIRQLES-GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 763
GG + E +L++ G +VV TPGR+ D++ A + V DEAD M GF+ Q
Sbjct: 374 GGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQ 433
Query: 764 IHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPVR 877
+ + + D Q ++ SAT V ++ + DPVR
Sbjct: 434 VKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVR 471
Score = 35.9 bits (79), Expect = 0.038
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Frame = +1
Query: 376 ASKXRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 528
A RDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 299 ALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 303
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 563 NAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEM 739
N K H I G N+ +R + +V+GTPG D + + + + + I+ VLDEAD M
Sbjct: 308 NLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVM 366
Query: 740 L-SRGFKD---QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ +GF D I+++ + S VQ +L SAT + V+ + +++ +
Sbjct: 367 IYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAI 415
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 328
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 563 NAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEM 739
N K H I G N+ +R + +V+GTPG D + + + + + I+ VLDEAD M
Sbjct: 333 NLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVM 391
Query: 740 L-SRGFKD---QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ +GF D I+++ + S VQ +L SAT + V+ + +++ +
Sbjct: 392 IYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAI 440
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 552
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 712
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +2
Query: 563 NAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEM 739
N K H I G N+ +R + +V+GTPG D + + + + + I+ VLDEAD M
Sbjct: 717 NLKIHYAIKGGNMAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVM 775
Query: 740 L-SRGFKD---QIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMRDPV 874
+ +GF D I+++ + S VQ +L SAT + V+ + +++ +
Sbjct: 776 IYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAI 824
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 554 DHLNAKCHACIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 733
D +C G N+ + +R LE+G +VVGTP RV+D+I L ++ V+DE D
Sbjct: 309 DSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEID 368
Query: 734 EMLS--RGFKDQIHDVFQML 787
+ L+ QI +F++L
Sbjct: 369 QFLAGKNNCAHQIESIFRVL 388
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 454 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 513
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDVLXVSXCFMRD 868
I + S + Q ++ SAT PD V + F+R+
Sbjct: 514 IETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 526 I 528
I
Sbjct: 434 I 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 454 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 513
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDVLXVSXCFMRD 868
I + S + Q ++ SAT PD V + F+R+
Sbjct: 514 IETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 526 I 528
I
Sbjct: 434 I 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 454 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 513
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDVLXVSXCFMRD 868
I + S + Q ++ SAT PD V + F+R+
Sbjct: 514 IETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRE 552
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA Q
Sbjct: 374 LVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQ 433
Query: 526 I 528
I
Sbjct: 434 I 434
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 25/124 (20%)
Frame = +2
Query: 581 CIGGXNVREDIRQLESGVHVVVGTPGRVYDMI-------------------------TRR 685
C GG +++ L SG VVV TPGR+ D + +R+
Sbjct: 253 CAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRK 312
Query: 686 ALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLSADVQVILLSATMPDDVLXVSXCFMR 865
++ VLDEAD ML F+DQ++++ ++ + + Q +L SATM +++ ++ ++
Sbjct: 313 ICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQ 372
Query: 866 DPVR 877
PV+
Sbjct: 373 KPVK 376
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKV 537
+A +D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V
Sbjct: 181 VALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQV 238
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 EXSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGXYAYGFEKPS 347
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 348 AIQQRAIMPCIQG 386
IQQ I + G
Sbjct: 173 PIQQACIPVALTG 185
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 584 IGGXNVREDIRQLESGVHVVVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFK 757
+GG N + +L GV ++V TPGR+ D + T L N +K ++DEAD +L GF+
Sbjct: 175 MGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFE 233
Query: 758 DQIHDVFQMLSADVQVILLSAT-MPDDVLXVSXCFMRDPVR 877
++ V + L Q +L SAT P V +PVR
Sbjct: 234 IEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVR 274
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIAL 549
+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+ L
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSEL 163
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 665 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 724
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDV 838
I + S + Q ++ SAT PD V
Sbjct: 725 IDTIVNYESMPKKENRQTLMFSATFPDSV 753
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 526 I 528
I
Sbjct: 645 I 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 665 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 724
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDV 838
I + S + Q ++ SAT PD V
Sbjct: 725 IDTIVNYESMPKKENRQTLMFSATFPDSV 753
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 526 I 528
I
Sbjct: 645 I 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG V + Q+E G ++VGT GR+ + + + FVLDEAD M+ + GF
Sbjct: 665 GGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTD 724
Query: 764 IHDVFQMLS----ADVQVILLSATMPDDV 838
I + S + Q ++ SAT PD V
Sbjct: 725 IDTIVNYESMPKKENRQTLMFSATFPDSV 753
Score = 34.7 bits (76), Expect = 0.089
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQ 525
L + D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL Q
Sbjct: 585 LIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQ 644
Query: 526 I 528
I
Sbjct: 645 I 645
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 9e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG NV + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +
Sbjct: 411 GGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPE 470
Query: 764 IHDVF---QMLSADV-QVILLSATMPDDVLXVSXCFMRD 868
I + M D Q ++ SAT P V + +R+
Sbjct: 471 IEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLRE 509
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 525
L + +D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 526 I 528
I
Sbjct: 391 I 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 9e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 587 GGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQ 763
GG NV + Q+ G ++VGT GRV A+ + + VLDEAD M+ S GF +
Sbjct: 411 GGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPE 470
Query: 764 IHDVF---QMLSADV-QVILLSATMPDDVLXVSXCFMRD 868
I + M D Q ++ SAT P V + +R+
Sbjct: 471 IEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLRE 509
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +1
Query: 373 LASKXRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQ 525
L + +D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA Q
Sbjct: 331 LVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQ 390
Query: 526 I 528
I
Sbjct: 391 I 391
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Frame = +2
Query: 554 DHLNAKCHACIGGXNVREDIRQLES-GVHVVVGTPGRVYDMI----TRRALHANTIKLFV 718
+ LN GG V ++I+ ++ V+++V TPGR++ +I T A T++L V
Sbjct: 105 EKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLV 164
Query: 719 LDEADEMLSRGFKDQIHDVFQMLSADVQVILLSAT 823
+DEAD F+D + ++ + + L SAT
Sbjct: 165 IDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVV 540
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVI 100
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +2
Query: 569 KCHACIGGXNVREDIRQLES--GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 742
KC GG + +++ L S ++++V T GR+ D + + + +K VLDEAD M+
Sbjct: 844 KCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
Query: 743 -SRGFKDQIHDVFQMLSADV-QVILLSATMPDDV 838
S F +++ + Q +L SA+ +D+
Sbjct: 904 DSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 10/55 (18%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQ 525
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +2
Query: 569 KCHACIGGXNVREDIRQLES--GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 742
KC GG + +++ L S ++++V T GR+ D + + + +K VLDEAD M+
Sbjct: 844 KCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMV 903
Query: 743 -SRGFKDQIHDVFQMLSADV-QVILLSATMPDDV 838
S F +++ + Q +L SA+ +D+
Sbjct: 904 DSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 10/55 (18%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQ 525
DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 534
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 535 VVIAL 549
+ AL
Sbjct: 87 HINAL 91
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Frame = +2
Query: 638 VVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLSAD-- 796
+VV TPGR++ M+ +K V+DE D M+ G+ ++ + + +
Sbjct: 122 IVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESE 181
Query: 797 ---VQVILLSATM 826
+Q ++ SAT+
Sbjct: 182 KEKLQTLVFSATL 194
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Frame = +1
Query: 388 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 534
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 535 VVIAL 549
+ AL
Sbjct: 254 HINAL 258
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Frame = +2
Query: 638 VVVGTPGRVYDMITRR-----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFQMLSAD-- 796
+VV TPGR++ M+ +K V+DE D M+ G+ ++ + + +
Sbjct: 289 IVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESE 348
Query: 797 ---VQVILLSATM 826
+Q ++ SAT+
Sbjct: 349 KEKLQTLVFSATL 361
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQIQKVV 540
DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI + +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +2
Query: 611 IRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV----- 775
+ ++ +G +++GT GR+ D + + ++ V DEAD +L KD + +
Sbjct: 503 LNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIK 562
Query: 776 ---FQMLSADVQVILLSATMPDDVLXVSXCFMR 865
F +A Q I+ SAT V+ V+ M+
Sbjct: 563 DAGFMESAATRQTIMTSATFNASVMTVANELMK 595
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Frame = +1
Query: 379 SKXRDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 525
++ R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 161 TERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 644 PPHEHHSPVGEYLHG-HWXHQCKHGI*HSSDH 552
P HEHH G++ HG H H HG HS H
Sbjct: 635 PHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAH 666
Score = 31.9 bits (69), Expect = 0.62
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -1
Query: 779 GRHHGS-GP*NLWTTFHQLHQEQKV*WCWHEAHDELSYHIHDLECPPPHEHHSPVGEYLH 603
G HHG G + H H E H +H ++H H E HH+P H
Sbjct: 523 GTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE-----HHHAPAH---H 574
Query: 602 GHWXHQCKHGI*H 564
GH H HG+ H
Sbjct: 575 GHHGHHGSHGVHH 587
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 382 KXRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQI 528
+ RDV A +G+GKT + + +L + + + QA+IL P + L QI
Sbjct: 155 RPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQI 204
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 394 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 531
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIR 127
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +1
Query: 391 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 528
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 333 FEKPSAIQQRAIMPCIQGTRCYRSSPV 413
F + AI++ A+ PC G CYR +P+
Sbjct: 2 FFRRQAIRKCALRPCSGGEACYRDTPL 28
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 394 VIAQAQSGTGKTATFSISILQQIDTSIREC 483
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U20864-1|AAC46663.1| 243|Caenorhabditis elegans Hypothetical
protein F32A5.4a protein.
Length = 243
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 581 CIGGXNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADE 736
C G D RQL G V G G ++T L+AN I+L L +++
Sbjct: 10 CAVGVASHRDKRQLSIGTISVSGAGGSTGCVVTGNVLYANGIRLRNLTSSEQ 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,685,756
Number of Sequences: 27780
Number of extensions: 466400
Number of successful extensions: 1327
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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