Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E15
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    93   4e-19
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     92   5e-19
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    92   5e-19
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   3.8  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   3.8  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.8  
07_01_0479 + 3606663-3607448                                           29   5.1  
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...    28   8.8  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = +1

Query: 112 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 276
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K+
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +1

Query: 112 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 273
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +1

Query: 112 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 273
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +1

Query: 661 PPPPXGXXGXXFXGPLPXSPPXXXPXXPXXXXXXXRXXPPP 783
           PPPP          P P  PP   P  P       +  PPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPP 589


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +1

Query: 664  PPPXGXXGXXFXGPLPXSPPXXXPXXPXXXXXXXRXXPPP 783
            PPP          PLP SPP   P  P          PPP
Sbjct: 1146 PPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPP 1185


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
 Frame = +1

Query: 661 PPPPXGXXGXX-FXGPLPXSP---PXXXPXXPXXXXXXXRXXPPPXGGXXXXPXXXG 819
           PPPP G        GP P  P   P   P  P          PPP GG    P   G
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPG 394


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +1

Query: 661 PPPPXGXXGXXFXGPLPXSPPXXXPXXPXXXXXXXRXXPPP 783
           PPPP G       GP P  PP   P  P       R   PP
Sbjct: 201 PPPPPGPF---MRGPPPMGPPQVRPGMPGGPPPGMRPGMPP 238


>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -1

Query: 782 GGGXXRXXXXXXXGXXGXXXGGEXGRGPXKXKPXXPXGGG 663
           GGG          G  G   GG  GRG  + +   P GGG
Sbjct: 148 GGGRGGGRGGGRGGFRGRGGGGFRGRGAPRGRGGPPRGGG 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,435,021
Number of Sequences: 37544
Number of extensions: 247222
Number of successful extensions: 609
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)