Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E14
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82084-2|CAB04976.1|  536|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>Z82084-2|CAB04976.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK1053.2 protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 128 WLSASPMCIAFVKRAAPKXANSLNTLAESAKKTIEELREKV-ESALAPETVKKNFGTMVD 304
           W     +C+ ++   A +  + + + AE  ++ +  L EK  E+  +    K +     D
Sbjct: 400 WCFCIALCLIWMYVCAKQRKHKMISKAEEEREAMLALLEKGHETEHSSRRAKPSVSVESD 459

Query: 305 SFNEFYKNLKPAE 343
            F++ +KN+KP++
Sbjct: 460 EFDKEWKNIKPSK 472


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,294,614
Number of Sequences: 27780
Number of extensions: 171645
Number of successful extensions: 471
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)