Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E13
         (1407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   3.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   3.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   9.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
            protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = -1

Query: 1200 GGXXREXVGRGXGVXRGXXXGGGVPXAGXXGXR 1102
            GG      GRG G  RG   GGG    G  G R
Sbjct: 70   GGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDR 102


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 3.0
 Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
 Frame = +2

Query: 1013 VPAPXLHXTPXXLXPXXXXGXPP-PFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXS 1186
            VP P     P    P    G  P P +    + P  P  G PPP   P     P P  S
Sbjct: 224  VPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRP--PMMGQPPPIRPPNPMGGPRPQIS 280


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 9.2
 Identities = 13/49 (26%), Positives = 14/49 (28%)
 Frame = +2

Query: 1055 PXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSLXXPP 1201
            P      PPP      R    P     PP       P P P   +  PP
Sbjct: 72   PKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,247
Number of Sequences: 2352
Number of extensions: 4156
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 162964395
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)