Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_E13
(1407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.21
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.21
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.21
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.49
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.64
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.64
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 31 2.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 2.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 2.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 4.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 7.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 7.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/93 (31%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Frame = +2
Query: 1055 PXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSL 1234
P G PPP P PA G+PPP PR P P PPT SL
Sbjct: 265 PPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSPPPPPPPRGSPPT-------GSL 312
Query: 1235 PPXDXAXRSXRV-XXXXPXXPXARXXLXHRSPP 1330
PP P P + RSPP
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
Score = 33.1 bits (72), Expect = 0.49
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSL 1189
P +P P P G PPP P P G+PPP P +P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGS 288
Query: 1190 XXPP 1201
PP
Sbjct: 289 PPPP 292
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +1
Query: 916 PXXAXXGPXXXXXSSPLNXAPXPPCXXHGARSXPXPX---PPPHPXXPXPXXXXXXSSPL 1086
P + P S PL + PP A S P P PPP P P S P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 1087 HXXXXPXPTXXSRRDPAXXSXXP 1155
P P R P S P
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/93 (31%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Frame = +2
Query: 1055 PXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSL 1234
P G PPP P PA G+PPP PR P P PPT SL
Sbjct: 286 PPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSPPPPPPPRGSPPT-------GSL 333
Query: 1235 PPXDXAXRSXRV-XXXXPXXPXARXXLXHRSPP 1330
PP P P + RSPP
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
Score = 33.1 bits (72), Expect = 0.49
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSL 1189
P +P P P G PPP P P G+PPP P +P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGS 309
Query: 1190 XXPP 1201
PP
Sbjct: 310 PPPP 313
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +1
Query: 916 PXXAXXGPXXXXXSSPLNXAPXPPCXXHGARSXPXPX---PPPHPXXPXPXXXXXXSSPL 1086
P + P S PL + PP A S P P PPP P P S P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 1087 HXXXXPXPTXXSRRDPAXXSXXP 1155
P P R P S P
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/93 (31%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Frame = +2
Query: 1055 PXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSL 1234
P G PPP P PA G+PPP PR P P PPT SL
Sbjct: 271 PPPRTGSPPP--PPTGSPPPPPAGGSPPP---PRAGSPPPPPPPRGSPPT-------GSL 318
Query: 1235 PPXDXAXRSXRV-XXXXPXXPXARXXLXHRSPP 1330
PP P P + RSPP
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
Score = 33.1 bits (72), Expect = 0.49
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSL 1189
P +P P P G PPP P P G+PPP P +P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGS 294
Query: 1190 XXPP 1201
PP
Sbjct: 295 PPPP 298
Score = 29.5 bits (63), Expect = 6.0
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Frame = +1
Query: 916 PXXAXXGPXXXXXSSPLNXAPXPPCXXHGARSXPXPX---PPPHPXXPXPXXXXXXSSPL 1086
P + P S PL + PP A S P P PPP P P S P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPP-PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 1087 HXXXXPXPTXXSRRDPAXXSXXP 1155
P P R P S P
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPP 320
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.1 bits (72), Expect = 0.49
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 910 PTPXXAXXGPXXXXXSSPLNXAPXPPCXXHGARSXPXPXPPPHP 1041
P P P + P AP PP + ++ P P PPP P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAP 71
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/92 (25%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +1
Query: 907 SPTPXXAXXGPXXXXXSSPLNX--APXPPCXXHGARSXPXPXPPPHPXXPXP-XXXXXXS 1077
+P P A P P + AP PP + + P P PPP P
Sbjct: 55 APYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPP 114
Query: 1078 SPLHXXXXPXPTXXSRRDPAXXSXXPXHXXPP 1173
+P P P ++ P P H PP
Sbjct: 115 APYPQHAVPAPAPYQQQPP--PPPPPPHYPPP 144
Score = 29.9 bits (64), Expect = 4.5
Identities = 31/110 (28%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGTPPPXXXPRXT-PXPLPTXS 1186
P PAP L P P PPP P PA PPP P+ P P P
Sbjct: 78 PAPAPPLASYPQNAVPVPA---PPPAPYPQHAVPA-PA---PPPAPYPQHAVPAPAPYQQ 130
Query: 1187 LXXPPTTXDH--XXISSLPPXDXAXRSXRVXXXXPXXPXARXXLXHRSPP 1330
PP H PP A S + P + H +PP
Sbjct: 131 QPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRP----AYIEHSAPP 176
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.64
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGT--PPPXXXPRXTPXP--LP 1177
PVP P TP + P PP R P P+ G PPP P TP P +P
Sbjct: 262 PVPPPPPSVTP--MPPPM-----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 314
Query: 1178 TXSLXXPPTTXDHXXISSLPP 1240
PP+ + +PP
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPP 335
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.64
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGT--PPPXXXPRXTPXP--LP 1177
PVP P TP + P PP R P P+ G PPP P TP P +P
Sbjct: 272 PVPPPPPSVTP--MPPPM-----PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP 324
Query: 1178 TXSLXXPPTTXDHXXISSLPP 1240
PP+ + +PP
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPP 345
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Frame = +2
Query: 1010 PVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGTP--PPXXXPRXTPXPLPTX 1183
P P P + L P P R P P+ +P PP P TP PT
Sbjct: 43 PPPPPSVGPKGVRLAPKKPHQHRPRRQFRSVRLPRTPSRNSPLTPPTKTPPHTPTRTPTT 102
Query: 1184 SLXXPPTTXDHXXISSL 1234
P T ISS+
Sbjct: 103 ESPVAPRTPGKVVISSV 119
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -3
Query: 1132 GPXGWXXWGAGXXXSEGGRXAXXXXGVQXXWGXVEXGGXDXXEXRXGNKXGGXRSXXGRT 953
GP GW G G GGR G G GG G GG R GR
Sbjct: 45 GPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGG--NWGGNGGGRGDWGGNGGGGRGGGGRG 102
Query: 952 XXXG 941
G
Sbjct: 103 DWGG 106
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +1
Query: 901 IXSPTPXXAXXGPXXXXXSSPLNXAPXPPCXXHGARSXPXPXPPPHPXXPXP 1056
I P P P ++P+ PP A P P PPP P P
Sbjct: 322 ILPPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTP 373
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 2.6
Identities = 27/105 (25%), Positives = 29/105 (27%)
Frame = +2
Query: 932 PXXXXXXGPPXXTXXPXXLVXXTXLXPVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXP 1111
P GPP P ++ P P H P G PPPF
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFG 328
Query: 1112 XXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSLPPXD 1246
P G PP P P PP H S PP D
Sbjct: 329 MGPPRGFMPPPHPMMFRGGPYPPFFPPPPP----HFMRPSSPPTD 369
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 2.6
Identities = 27/105 (25%), Positives = 29/105 (27%)
Frame = +2
Query: 932 PXXXXXXGPPXXTXXPXXLVXXTXLXPVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXP 1111
P GPP P ++ P P H P G PPPF
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFG 328
Query: 1112 XXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSLPPXD 1246
P G PP P P PP H S PP D
Sbjct: 329 MGPPRGFMPPPHPMMFRGGPYPPFFPPPPP----HFMRPSSPPTD 369
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +2
Query: 1076 PPPFTXXXXRXPXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXISSLPP 1240
PPP P A G PPP P P P PP ++ PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 976 PXPPCXXHGARSXPXPXPPPH-PXXPXPXXXXXXSSPLHXXXXPXPTXXSRRDPAXXSXX 1152
P PP S P P PPP P P P P+ P P R P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPM---TPPSPQRRPPRTPPSPEPR 181
Query: 1153 PXHXXPPS 1176
PPS
Sbjct: 182 NPPRTPPS 189
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.5
Identities = 25/83 (30%), Positives = 25/83 (30%)
Frame = +2
Query: 953 GPPXXTXXPXXLVXXTXLXPVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGT 1132
GPP P L T P P P P L P PPP P
Sbjct: 712 GPPP----PPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 1133 PPPXXXPRXTPXPLPTXSLXXPP 1201
PPP P P P P PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.5
Identities = 25/83 (30%), Positives = 25/83 (30%)
Frame = +2
Query: 953 GPPXXTXXPXXLVXXTXLXPVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGT 1132
GPP P L T P P P P L P PPP P
Sbjct: 712 GPPP----PPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 1133 PPPXXXPRXTPXPLPTXSLXXPP 1201
PPP P P P P PP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.5
Identities = 25/83 (30%), Positives = 25/83 (30%)
Frame = +2
Query: 953 GPPXXTXXPXXLVXXTXLXPVPAPXLHXTPXXLXPXXXXGXPPPFTXXXXRXPXXPAXGT 1132
GPP P L T P P P P L P PPP P
Sbjct: 295 GPPP----PPGLPPITGGPPPPPP-----PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 1133 PPPXXXPRXTPXPLPTXSLXXPP 1201
PPP P P P P PP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPP 368
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 6.0
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -2
Query: 1055 GXGQXGXGGGWGXGXXRAPXXXQGGXGAXXXGEDXXSXXGPXXAXXGVGEXIXXPXXXGG 876
G G+ G G GWG G R G G G G G G GG
Sbjct: 54 GWGRGGGGSGWGGG--RGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGG---GGGRGGGG 108
Query: 875 VXRXGAGG 852
R G GG
Sbjct: 109 GGRGGGGG 116
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 1109 PXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXI---SSLPP 1240
P P PPP P +P P P PP I SS+PP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 506
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 7.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 1109 PXXPAXGTPPPXXXPRXTPXPLPTXSLXXPPTTXDHXXI---SSLPP 1240
P P PPP P +P P P PP I SS+PP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPP 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,737,151
Number of Sequences: 27780
Number of extensions: 134634
Number of successful extensions: 1032
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3996164352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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