Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E12
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128826-1|BAC87627.1| 1350|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AK125136-1|BAC86061.1|  178|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>AK128826-1|BAC87627.1| 1350|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46270 fis, clone TESTI4028042, highly  similar
           to Homo sapiens NYD-SP11 protein (NYD-SP11). ).
          Length = 1350

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +2

Query: 182 AEXSFNCSVMSKETXFTVLPITANDEEEIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEE 361
           +E   NC ++  +    V  + +  E+ +    KRTF + E L     +  +GS   +  
Sbjct: 28  SEDPKNCLIVLSDRSQAVAWMKSKTEDMVE---KRTFSMTERLPPIQSMVHAGSFHILVV 84

Query: 362 YCRDSLLK--GLSFKAVEPKGKI 424
           YC D +L+  G  F+A +P GK+
Sbjct: 85  YCGDLILRLFGDHFRAFKPLGKV 107


>AK125136-1|BAC86061.1|  178|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43146 fis, clone CTONG3008566. ).
          Length = 178

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -3

Query: 877 FXESSFMYTASXTCGSLGTIRGS-PFSLMSLYAAX*MQLKPSLSADIAE*ALDVSMPEYS 701
           F  S+ +     +     T+R S   + +SL A      KPSLSA  A     VS+P  S
Sbjct: 42  FLTSTVLMDTDASPSGEDTVRASLSHAFLSLTARSQPPTKPSLSASQAA-MCQVSLPRLS 100

Query: 700 YAALLC 683
           + ALLC
Sbjct: 101 WKALLC 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,552,213
Number of Sequences: 237096
Number of extensions: 1933571
Number of successful extensions: 4179
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4179
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)