Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E12
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68337-5|CAA92743.1|  230|Caenorhabditis elegans Hypothetical pr...    33   0.36 
AF022983-4|AAB69944.1|  387|Caenorhabditis elegans Hypothetical ...    30   2.6  
U97405-3|AAB53008.1|  192|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>Z68337-5|CAA92743.1|  230|Caenorhabditis elegans Hypothetical
           protein M7.8 protein.
          Length = 230

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
 Frame = +2

Query: 242 ITANDEE-EIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEEYCRDSLLKGLSFKA----- 403
           +  N+E+ E++  L  +F +DEPLN A  +    SC E+E+    +L + L  ++     
Sbjct: 16  VLRNEEKSEMLKFLLESFRVDEPLNRASKI----SCEEIEKCLDGALDRALKTESSILAR 71

Query: 404 VEPKGKIIGTMINGICPLXXXXXXNSLLNQALRCPNPKFQRILHILARREEGA-KLAEKF 580
            +   +I+G M+N +          SL        + +F  I   +A   E   +L E F
Sbjct: 72  SQDTHEIVGCMLNSV-----WRRDESLCTPGEEDKDFEFHTIRKEVAMVAEILNELHESF 126

Query: 581 ----PSDKVFVDIXVAATDPHWRRRGVMNELLRETEN 679
               P   V +   +++   + RR+G+ ++ +  TEN
Sbjct: 127 WSLRPDQDVVLHFEISSVSVNHRRQGLASKFMNWTEN 163


>AF022983-4|AAB69944.1|  387|Caenorhabditis elegans Hypothetical
           protein R13D11.4 protein.
          Length = 387

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 218 ETXFTVLPITANDEEEIMDLLKRTFFIDEPLNEAVGLYDSGSCLEVEEYCRDSLLKGLSF 397
           E  +  + +T  +  E+ + L   F ++EP+N A+G+        V++    +L    SF
Sbjct: 253 EDNYEFVQLTNENSSELSEFLMSHFLLEEPMNRAIGMSRENFQPFVDKLFERTLNIPFSF 312

Query: 398 KAVE 409
             VE
Sbjct: 313 ALVE 316


>U97405-3|AAB53008.1|  192|Caenorhabditis elegans Hypothetical
           protein T09B4.6 protein.
          Length = 192

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +1

Query: 592 SFCGYXGCSYRPALEEKRCNER---VIERNGEYHKATRHKNTPAWIHLAPIPRCQLRG 756
           SFCG+       A++ KRC +R   ++  +G            A++HL  +  C   G
Sbjct: 27  SFCGHLSSLLSEAIDAKRCVDRYDLIVFADGRSDDTIVQAARRAYVHLGELQECMNNG 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,061,911
Number of Sequences: 27780
Number of extensions: 323647
Number of successful extensions: 808
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)