Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E06
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066597-1|AAH66597.1|  537|Homo sapiens copine III protein.           31   5.5  
BC036242-1|AAH36242.1|  537|Homo sapiens copine III protein.           31   5.5  
BC007017-1|AAH07017.1|  262|Homo sapiens Unknown (protein for IM...    31   5.5  
AF077226-1|AAD46074.2|  537|Homo sapiens copine III protein.           31   5.5  
AB014536-1|BAA31611.2|  540|Homo sapiens KIAA0636 protein protein.     31   5.5  
AB208834-1|BAD92071.1| 1387|Homo sapiens Zinc finger protein 236...    30   9.5  

>BC066597-1|AAH66597.1|  537|Homo sapiens copine III protein.
          Length = 537

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +3

Query: 186 VHRKXVFHQRVKXFAIPFKXXIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 365
           VHR  V    +     PFK  + +L Y D +K I       DND SH        G   +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231

Query: 366 FVTVRMKSQRHHPLNFE 416
            +T   ++ R  P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248


>BC036242-1|AAH36242.1|  537|Homo sapiens copine III protein.
          Length = 537

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +3

Query: 186 VHRKXVFHQRVKXFAIPFKXXIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 365
           VHR  V    +     PFK  + +L Y D +K I       DND SH        G   +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231

Query: 366 FVTVRMKSQRHHPLNFE 416
            +T   ++ R  P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248


>BC007017-1|AAH07017.1|  262|Homo sapiens Unknown (protein for
           IMAGE:3950554) protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +3

Query: 186 VHRKXVFHQRVKXFAIPFKXXIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 365
           VHR  V    +     PFK  + +L Y D +K I       DND SH        G   +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231

Query: 366 FVTVRMKSQRHHPLNFE 416
            +T   ++ R  P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248


>AF077226-1|AAD46074.2|  537|Homo sapiens copine III protein.
          Length = 537

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +3

Query: 186 VHRKXVFHQRVKXFAIPFKXXIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 365
           VHR  V    +     PFK  + +L Y D +K I       DND SH        G   +
Sbjct: 177 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 231

Query: 366 FVTVRMKSQRHHPLNFE 416
            +T   ++ R  P+ FE
Sbjct: 232 TMTKLKEASRSSPVEFE 248


>AB014536-1|BAA31611.2|  540|Homo sapiens KIAA0636 protein protein.
          Length = 540

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 23/77 (29%), Positives = 32/77 (41%)
 Frame = +3

Query: 186 VHRKXVFHQRVKXFAIPFKXXIKTLSYTDPEKRIIKGVAAIDNDFSHASANITEGGVGYS 365
           VHR  V    +     PFK  + +L Y D +K I       DND SH        G   +
Sbjct: 180 VHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYDNDGSHDLI-----GTFQT 234

Query: 366 FVTVRMKSQRHHPLNFE 416
            +T   ++ R  P+ FE
Sbjct: 235 TMTKLKEASRSSPVEFE 251


>AB208834-1|BAD92071.1| 1387|Homo sapiens Zinc finger protein 236
            variant protein.
          Length = 1387

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
 Frame = +1

Query: 301  QLLTMTSPTPALTSRKAVSATPLSPSE*KAKDIILSTSRLKFTSSQSL-----QEMISKW 465
            Q +T+T      TS    S TP+SPS    +++++S+S +   +S +L     Q M+S  
Sbjct: 1064 QEITLTISELNTTSGSLPSTTPMSPSAISTQNLVMSSSGVGGDASVTLTLADTQGMLSGG 1123

Query: 466  KTAVTINV 489
               VT+N+
Sbjct: 1124 LDTVTLNI 1131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,012,503
Number of Sequences: 237096
Number of extensions: 1655369
Number of successful extensions: 2986
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)