Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E04
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0187 + 12805788-12807007,12807059-12807186,12807811-128078...    31   1.2  
03_02_0513 + 9035204-9035422,9035552-9036091,9036512-9036742,903...    29   3.7  
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085...    29   4.9  
06_03_0756 + 24244313-24244999                                         28   8.5  

>06_02_0187 +
           12805788-12807007,12807059-12807186,12807811-12807859,
           12808508-12808853
          Length = 580

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
 Frame = -1

Query: 311 LSMIRLLTTFWMMEPLPWL-----SYSKL*RTALS*SPVRMLLYSFSSRSWLEVSADSST 147
           L+++ L+   W + P   L     + S      L  SP   +  SF S +    S D++T
Sbjct: 36  LALLTLIMALWQLHPYQPLVLLPAALSSSPCPLLPRSPTSGIAVSFLSTAAATNSTDTAT 95

Query: 146 TPALAASMHIANTTRSFILLGALSRSPSSLQI 51
            P   A+  +A TTR  +      R P+  ++
Sbjct: 96  VPTTTAAARVAATTRPTLPARQRERDPNKREL 127


>03_02_0513 +
           9035204-9035422,9035552-9036091,9036512-9036742,
           9036829-9036969,9037344-9037541,9037644-9037937
          Length = 540

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 29/100 (29%), Positives = 47/100 (47%)
 Frame = +1

Query: 151 ELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTME 330
           E++ DTS +  EE L+  ++  D D A    L+  S  +  +I+      + D R  T+ 
Sbjct: 444 EITPDTSTETAEEMLHRWLMKEDVDRA----LDGLSPRERQVIRYRFG--MDDGRLRTLH 497

Query: 331 YCYKLWVGNGQEIVRKYFPLNFRTHHGRKLCQDHLQKLQP 450
              +L +G  +E +R+   + FR   GRK  Q     LQP
Sbjct: 498 DIGRL-MGVSRERIRQIELVAFRKLRGRKKVQSLQHYLQP 536


>04_04_1263 -
           32207636-32207938,32208020-32208170,32208263-32208500,
           32208604-32208814,32208927-32209108,32209196-32209297,
           32210002-32211187,32212103-32212499,32212551-32212582,
           32212885-32213157,32213307-32213394,32213486-32213723,
           32213824-32214034,32214119-32214300,32214378-32214479,
           32214801-32216224,32216751-32216822,32217688-32217719,
           32218186-32218263,32218425-32218512,32218608-32218845,
           32219060-32219162,32219386-32219558,32219644-32219745,
           32219825-32220606,32220659-32221012,32224055-32224140,
           32224250-32224400,32224534-32224771,32224876-32225119,
           32225190-32225368,32225577-32225675,32225835-32227083
          Length = 3195

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
 Frame = +1

Query: 241 SLEYESQGKGSIIQNVVNNLIIDKRRNTME------YCYKLWV-GNGQEIVRKYFPLNFR 399
           S++ ++   G ++  +V+ L I   + T        Y ++LW  GN  E++ K+F  ++ 
Sbjct: 684 SVKSDTYSFGVLLLEIVSGLKISSSKLTPNFFSLTAYAWRLWKDGNATELLDKFFVDSYP 743

Query: 400 THHGRKLCQ--DHLQKLQP 450
            H     CQ  D L   +P
Sbjct: 744 LHEAFSFCQSDDRLTPAKP 762


>06_03_0756 + 24244313-24244999
          Length = 228

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 705 LPARQVRKRRPV-----LHLQSPIQRCLGARYDRERLXRRKAVGHDGE 833
           LP +Q++ R P       H +S      GAR  R R  RR+  G DGE
Sbjct: 166 LPLQQLQGRHPAPASPKCHTRSSDDEGEGARMHRRRTERRRRGGADGE 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,838,147
Number of Sequences: 37544
Number of extensions: 439969
Number of successful extensions: 1269
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)