Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_E03
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisia... 250 4e-66
BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in endop... 250 4e-66
AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in endop... 250 4e-66
AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein. 250 4e-66
AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein. 250 4e-66
CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein. 248 2e-65
AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in endop... 206 6e-53
AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in endop... 151 4e-36
AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein. 151 4e-36
AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in endop... 41 0.005
BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 1... 31 7.2
AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 1... 31 7.2
AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 1... 31 7.2
>BT007224-1|AAP35888.1| 196|Homo sapiens similar to S. cerevisiae
RER1 protein.
Length = 196
Score = 250 bits (613), Expect = 4e-66
Identities = 110/185 (59%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>BC004965-1|AAH04965.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog (S. cerevisiae) protein.
Length = 196
Score = 250 bits (613), Expect = 4e-66
Identities = 110/185 (59%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>AL513477-2|CAI22604.1| 196|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologquitin protein ligase 1
protein.
Length = 196
Score = 250 bits (613), Expect = 4e-66
Identities = 110/185 (59%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>AJ001421-1|CAA04754.1| 196|Homo sapiens Rer1 protein protein.
Length = 196
Score = 250 bits (613), Expect = 4e-66
Identities = 110/185 (59%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>AF157324-1|AAF67490.1| 214|Homo sapiens RER1 protein protein.
Length = 214
Score = 250 bits (613), Expect = 4e-66
Identities = 110/185 (59%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>CR456806-1|CAG33087.1| 196|Homo sapiens RER1 protein.
Length = 196
Score = 248 bits (608), Expect = 2e-65
Identities = 110/185 (59%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTIQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLFCITMKRXIKHMIXYRYLPFTH 794
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LFCITMKR IKHMI YRY+PFTH
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTH 179
Query: 795 XXPKY 809
+Y
Sbjct: 180 GKRRY 184
>AL513477-4|CAI22606.1| 158|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homologdogene protein.
Length = 158
Score = 206 bits (504), Expect = 6e-53
Identities = 91/159 (57%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFWLSVTKSTLIAFCCTFVDAFNIPVFWPILVMYFITLF 731
KFW + TK L+A CTF DAFN+PVFWPILVMYFI LF
Sbjct: 120 KFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLF 158
>AL513477-5|CAI22607.1| 187|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog; alpha polypeptide
protein.
Length = 187
Score = 151 bits (365), Expect = 4e-36
Identities = 66/123 (53%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFW 623
KFW
Sbjct: 120 KFW 122
>AF091071-1|AAC72940.1| 206|Homo sapiens Rer1 protein.
Length = 206
Score = 151 bits (365), Expect = 4e-36
Identities = 66/123 (53%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQGWYIVTYALGIYHLNLFIAFLTPKIDPAMDLDDDENGPALPTRASEEFRPFIRRLPEF 614
QGWYIVTYALGIYHLNLFIAFL+PK+DP++ ++D ++GP+LPT+ +EEFRPFIRRLPEF
Sbjct: 61 LQGWYIVTYALGIYHLNLFIAFLSPKVDPSL-MEDSDDGPSLPTKQNEEFRPFIRRLPEF 119
Query: 615 KFW 623
KFW
Sbjct: 120 KFW 122
Score = 42.7 bits (96), Expect = 0.002
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2
Query: 623 AVRYQKHFNSFLLYFCGCFQYSSILAYSSYVFHNIILYYYEETNQAYD 766
A YQ H + LYF FQ +LA S V H+ +LY+ EE NQA+D
Sbjct: 159 ACGYQGHPCGYGLYFLRRFQRPGVLADSGDVLHHALLYHDEEANQAHD 206
>AL513477-3|CAI22605.1| 117|Homo sapiens RER1 retention in
endoplasmic reticulum 1 homolog, 11, 17.3kDa protein.
Length = 117
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 258 MMDGNDLSSEITRK-GILSQGWTRISQVYQSTLDRWTPHAKTRWVGSALVMAAFIIRIIT 434
M +G+ + + K ++ + +TR+ Q+YQS LD+ TP+ RWV + + ++IR+
Sbjct: 1 MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYL 60
Query: 435 KQ 440
Q
Sbjct: 61 LQ 62
>BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 407 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 318
H QG PPC C+ P+ C + YSCP
Sbjct: 338 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
>AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 12
protein.
Length = 646
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 407 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 318
H QG PPC C+ P+ C + YSCP
Sbjct: 471 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 501
>AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 30.7 bits (66), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 407 HDQGTS-NPPCLCVRGPSV*CTLINLRYSCP 318
H QG PPC C+ P+ C + YSCP
Sbjct: 338 HQQGPGLTPPCPCLMAPAPPCHALPPLYSCP 368
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,593,646
Number of Sequences: 237096
Number of extensions: 2130470
Number of successful extensions: 3942
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3933
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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