Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E02
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011551-1|AAH11551.1|  502|Homo sapiens zinc finger, C3HC-type ...    31   7.1  
AK022373-1|BAB14024.1|  502|Homo sapiens protein ( Homo sapiens ...    31   7.1  
AK001317-1|BAA91619.1|  481|Homo sapiens protein ( Homo sapiens ...    31   7.1  
AJ537494-1|CAD61161.1|  502|Homo sapiens nuclear interacting par...    31   7.1  

>BC011551-1|AAH11551.1|  502|Homo sapiens zinc finger, C3HC-type
           containing 1 protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +2

Query: 17  CLXYSWPSFILCVVCCLAFXAPXCAKSAPAFVCLRPRRVCAGF*RHTCTKH 169
           C  Y W +    ++ C +  A  CA   PAF   R ++ CA   +  CT H
Sbjct: 102 CAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAH 152


>AK022373-1|BAB14024.1|  502|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12311 fis, clone MAMMA1002011. ).
          Length = 502

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +2

Query: 17  CLXYSWPSFILCVVCCLAFXAPXCAKSAPAFVCLRPRRVCAGF*RHTCTKH 169
           C  Y W +    ++ C +  A  CA   PAF   R ++ CA   +  CT H
Sbjct: 102 CAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAH 152


>AK001317-1|BAA91619.1|  481|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10455 fis, clone NT2RP1001014. ).
          Length = 481

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +2

Query: 17  CLXYSWPSFILCVVCCLAFXAPXCAKSAPAFVCLRPRRVCAGF*RHTCTKH 169
           C  Y W +    ++ C +  A  CA   PAF   R ++ CA   +  CT H
Sbjct: 81  CAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAH 131


>AJ537494-1|CAD61161.1|  502|Homo sapiens nuclear interacting
           partner of ALK protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = +2

Query: 17  CLXYSWPSFILCVVCCLAFXAPXCAKSAPAFVCLRPRRVCAGF*RHTCTKH 169
           C  Y W +    ++ C +  A  CA   PAF   R ++ CA   +  CT H
Sbjct: 102 CAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAH 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,718,757
Number of Sequences: 237096
Number of extensions: 1850578
Number of successful extensions: 4545
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4545
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)