Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_E02
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical...    32   0.60 
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical pr...    28   7.4  
DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated...    28   7.4  
Z81068-8|CAB02988.1|  490|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    28   9.8  

>AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical
           protein Y71H2B.1 protein.
          Length = 143

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 192 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 305
           LYM   +G+Y+   A KC +Y K+  G+   EA++  I+
Sbjct: 87  LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +2

Query: 503 PKTKPARKSPXSLPPCWKTTE--FTSRSCPPRTNS 601
           PKT+P    P ++P CW+     F     PPR N+
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNN 452


>Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical
           protein C45B11.1a protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTXSVLGASVALEASAHTAR 122
           ++I  P  SFRY+  L   ++ SPM ++  S S    +     V + ++ H+ R
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129


>Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical
           protein C15H7.4 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 150 ATLAPSTDXVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK 314
           AT +P+ +  L ++   +V  G  E  +A   +   EKK EV+     + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190


>DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated
           kinase PAK-2 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTXSVLGASVALEASAHTAR 122
           ++I  P  SFRY+  L   ++ SPM ++  S S    +     V + ++ H+ R
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR 129


>Z81068-8|CAB02988.1|  490|Caenorhabditis elegans Hypothetical
           protein F25H5.7 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 TLAPSTDXVLAEQL-YMSVVIGEYETAIAKCSEYLKEKKGEVIK 281
           TL+     +  E++ Y+ ++   +E  + KC+ Y  EK GEV+K
Sbjct: 255 TLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 298


>U80447-7|AAB37811.1|  518|Caenorhabditis elegans Hypothetical
           protein F55F8.7 protein.
          Length = 518

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 153 TLAPSTDXVLAEQL-YMSVVIGEYETAIAKCSEYLKEKKGEVIK 281
           TL+     +  E++ Y+ ++   +E  + KC+ Y  EK GEV+K
Sbjct: 256 TLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVK 299


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
           lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -2

Query: 278 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYXISAWCKCGVRSQRTHGEDEG 114
           DN + +  Q FR+ G S +     +  +       IS+W +C  +     GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,183,876
Number of Sequences: 27780
Number of extensions: 288341
Number of successful extensions: 949
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)