Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_D24
(952 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.015
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.034
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.9
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 7.8
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
PP P PP P P P P P PPP P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXP 858
P P P P P P PP PPPP P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 29.1 bits (62), Expect = 0.96
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 779 PXPXPXXPXXXPXXPXXXPXXPXPXXPXXXPPXXPXXXXXXXXXXPXXPP 928
P P P P P P P P PP P P PP
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPP 876
PP P PP P P PP P P PPP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMP----PKVPPPP 205
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
PP P P P PP P P PP P PP P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVPPMPP 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPP 843
PP P PP P P PP P PP PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP-MPAGPPSAPPPP 1734
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
PP P P PP PP PP P P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMP-AGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXXXP 918
P P P P P PPPP P PP P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 736 PXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
P P P P P P P PPPP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
P P P P PP P PPPP PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
PP P P P P P PP PPPP PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 769 PXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXXXP 918
P P P P P P PP P P PPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXP 858
P PP P PP P PPPP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPP 825
PP P PP P PP P PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
PP P PP P P PP P P PP P P P P
Sbjct: 436 PPSLPMGAPAAPPLPPS-APIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 32.7 bits (71), Expect = 0.078
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXXXP 918
P PP P P P P PP P P PP P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPP---XXPPPPXXXXPXXXPPPXP 882
PP P P P PP P PP P P PPP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXX 912
PP PP P P P P PP PP P P P P
Sbjct: 404 PPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Query: 913 XP 918
P
Sbjct: 463 MP 464
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 736 PXXXXXXPXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXXX 915
P P PP P P PP P P PP P P P P P
Sbjct: 418 PTPPSLPPSAPPSLP---PSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGMPAAPPLPPAA 473
Query: 916 P 918
P
Sbjct: 474 P 474
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.059
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 811 PXXPPXXPPPPXXXXPXXXPPPXP 882
P PP PPPP P PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXXPPPP 843
PP P P P P P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.73
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 811 PXXPPXXPPPPXXXXPXXXPPPXP 882
P P PPPP P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPP 840
P P P P P P P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEP--PSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXPXXXXXXXPXXXP 918
P PP P P P PP PP P PP P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPP-VPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/65 (27%), Positives = 18/65 (27%), Gaps = 4/65 (6%)
Frame = +1
Query: 736 PXXXXXXPXXPPXXPXPXPXXPP-XXPXXPPXXPPP---PXXXXPXXXPPPXPXXXXXXX 903
P P PP P P P P P P P P P PP P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Query: 904 PXXXP 918
P P
Sbjct: 1113 PVPAP 1117
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 223 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 288 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 766 PPXXPXPXPXXPPXXPXXPPXX--PPPPXXXXPXXXPPPXP 882
PP P PP P PPPP P PP P
Sbjct: 301 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 757 PXXPPXXPXPXPXXPPXXPXXPPXXPPPPXXXXPXXXPPPXP 882
P PP P P P P PP P P P PP P
Sbjct: 104 PREPPLPNEPVPEEP--LPGEPPL-PDEPVPEEPLPGEPPLP 142
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.4 bits (48), Expect(2) = 7.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 811 PXXPPXXPPPPXXXXPXXXPPPXP 882
P PP P P PPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 20.6 bits (41), Expect(2) = 7.8
Identities = 9/31 (29%), Positives = 9/31 (29%)
Frame = +1
Query: 733 PPXXXXXXPXXPPXXPXPXPXXPPXXPXXPP 825
PP P P PP P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,807,055
Number of Sequences: 5004
Number of extensions: 20455
Number of successful extensions: 192
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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