Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D22
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983     30   2.2  
12_02_1174 - 26696869-26698191                                         30   2.9  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    29   5.2  
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206...    29   5.2  

>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
          Length = 448

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 23/75 (30%), Positives = 23/75 (30%), Gaps = 2/75 (2%)
 Frame = -3

Query: 907 PXXGPXVXXXXGGXGXTGPXXGGXTXTGXXXXXQXGXMXKAPXXPGREKGGX--GXRXXG 734
           P  G       GG G  G   GG    G       G    A    G   GG   G    G
Sbjct: 269 PGAGTGAITGGGGGGKGGGGGGGGNTGGGIGGSTGGGGRGAGAGVGGITGGGDGGFPGGG 328

Query: 733 XGRXQESARGGFPGG 689
            G       GGFPGG
Sbjct: 329 GGGFSGGGGGGFPGG 343


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 697 ETPLVRSPXPDPXRXPXYXVRLSPFREXXXLSPXPPP 807
           +TP   SP P P   P    R+ P      + P PPP
Sbjct: 114 KTPPALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPP 150


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +1

Query: 616 TSITKSTLKSXVAKPDRTIKIPGVSPLETPLVRSPXPDPX----RXPXYXVRLSPFREXX 783
           +S T++TL+  +  PD     P   PL TP V +P P P     R P    R+ P     
Sbjct: 41  SSPTQTTLQQ-LHSPDS----PPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPL 95

Query: 784 XLSPXPPP 807
             +P PPP
Sbjct: 96  LPTPPPPP 103


>03_02_0910 +
           12317493-12317960,12319678-12319734,12320592-12320666,
           12321219-12321299,12321472-12321546,12321818-12321862,
           12321975-12322064,12322153-12322254,12322366-12322420,
           12324966-12325027,12325521-12325555,12325877-12326115,
           12326219-12328035
          Length = 1066

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +1

Query: 679 PGVSPLETPLVRSPXPDPXRXPXYXVRLSPFREXXXLSPXPPP 807
           P + P   P  R P P P        R +P R+     P PPP
Sbjct: 23  PNLKPKPAPTTRGPCPSPR---TLVARAAPRRDDSTAPPPPPP 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,383,590
Number of Sequences: 37544
Number of extensions: 369032
Number of successful extensions: 926
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)