Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_D19
(1289 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 34 0.28
11_06_0610 - 25449085-25453284 34 0.28
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.65
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.5
04_03_0904 + 20717005-20718087 31 1.5
03_02_0738 - 10824121-10825572 31 1.5
09_02_0543 + 10427321-10428315,10428440-10429154 29 6.0
11_01_0385 + 2915532-2916482 29 8.0
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 8.0
03_02_0765 + 11000724-11002496 29 8.0
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.9 bits (74), Expect = 0.28
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXR-PXSXESXP-PXPGXPSXXPXEXS 748
P P P PG A + P P + P E P P P P P E
Sbjct: 221 PPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDY 280
Query: 749 XPPSTXXXSXPAXPSXPXPXXXP 817
P+ P P P P P
Sbjct: 281 WSPTAVTPPEPTKPKPPPPSPPP 303
Score = 29.5 bits (63), Expect = 6.0
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +2
Query: 581 PXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXPPS 760
P P P P S+ P P +P S PP PS P P
Sbjct: 153 PPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPS-PPPPPPTRPPSVKPPVVQPKPQ 211
Query: 761 TXXXSXPAXPSXPXPXXXP 817
P P P P P
Sbjct: 212 PPPTLPPPSPPPPPPTVPP 230
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.9 bits (74), Expect = 0.28
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP 754
P P P P P S P P V P +S PP S P E S P
Sbjct: 1193 PPPPVKSPPPPAP---VISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPP 1249
Query: 755 PSTXXX-SXPAXPSXPXP 805
P+ S PA S P P
Sbjct: 1250 PAAPVILSPPAVKSLPPP 1267
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +2
Query: 638 PNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXPPSTXXXSXPAXPSXPXPXXXP 817
P S P P + S P P P P E S PPST S P PS P P
Sbjct: 1059 PTKSSPPQVPVTSEPPPAKSSPPHEPISPPETP-EKSYPPSTPEESSP--PSVPKASSPP 1115
Score = 29.5 bits (63), Expect = 6.0
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP 754
P P P P S P +S P P S E PP P+ P P
Sbjct: 751 PIPPTSHTSPPTPEEYTPS-PPKSSPPEEKSPP---PHSPEKSPPSEAHPTSPPPSEKSP 806
Query: 755 PSTXXXSXPAXP-SXPXP 805
P+ S P P P P
Sbjct: 807 PTPAEESSPPTPEKSPSP 824
Score = 29.5 bits (63), Expect = 6.0
Identities = 23/92 (25%), Positives = 28/92 (30%)
Frame = +2
Query: 530 APXTHLSTXXXXSCGPXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPP 709
+P T S + P +P P P +S P P V P +S PP
Sbjct: 1113 SPPTEKSLPPPATVSLPPPTVKPLP--PPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPP 1170
Query: 710 XPGXPSXXPXEXSXPPSTXXXSXPAXPSXPXP 805
S P S PP P P P
Sbjct: 1171 PAPVISPPPPVKSPPPPAPVILPPPPVKSPPP 1202
Score = 29.1 bits (62), Expect = 8.0
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = +2
Query: 605 SXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXPPSTXXXSXPA 784
S P S+ P T P P E PP P P PP P
Sbjct: 1119 SLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPP 1178
Query: 785 XPSXPXPXXXP 817
P P P
Sbjct: 1179 PPVKSPPPPAP 1189
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/77 (24%), Positives = 23/77 (29%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP 754
P P P P P + P S P + P PP P P + P
Sbjct: 1161 PPPPIKSPPP--PAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPP 1218
Query: 755 PSTXXXSXPAXPSXPXP 805
P+ P S P P
Sbjct: 1219 PAPVILPPPPVKSPPPP 1235
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/77 (24%), Positives = 23/77 (29%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP 754
P P P P P + P S P + P PP P P + P
Sbjct: 1225 PPPPVKSPPP--PAPVISPPPPEKSPPPAAPVILSPPAVKSLPPPAPVSLPPPPVKSLPP 1282
Query: 755 PSTXXXSXPAXPSXPXP 805
P+ P S P P
Sbjct: 1283 PAPVSLPPPVVKSLPPP 1299
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.7 bits (71), Expect = 0.65
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +2
Query: 683 PXSXESXPPXPGX--PSXXPXEXSXPPSTXXXSXPAXPSXPXPXXXP 817
P E PP P P P S PP+T P PS P P P
Sbjct: 1140 PPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPP 1186
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXP--SXXPXEXS 748
P P P P P AS P P P PP P P S P
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
Query: 749 XPPSTXXXSXPAXPSXPXPXXXP 817
PP P P P P P
Sbjct: 624 PPPLPNHSVLPPPPPPPPPPSLP 646
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/99 (23%), Positives = 27/99 (27%)
Frame = +2
Query: 521 PXXAPXTHLSTXXXXSCGPXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXES 700
P P + T S P P P P P S P P S +
Sbjct: 162 PKPTPTPYTPTPTPPSYKPQPKPT-PTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKP 220
Query: 701 XPPXPGXPSXXPXEXSXPPSTXXXSXPAXPSXPXPXXXP 817
P P+ P PP T + P P P P
Sbjct: 221 QPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPP 259
>03_02_0738 - 10824121-10825572
Length = 483
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 695 ESXPPXPGXPSXXPXEXSXPPSTXXXSXPAXPSXP 799
++ PP P PS P S PP S P P+ P
Sbjct: 75 DTSPPPPSPPSSSPPPLSFPPPPPPPSSPPPPALP 109
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +2
Query: 683 PXSXESXPPXPGXPSXXPXEXSXPPSTXXXSXPAXPSXPXPXXXP 817
P ES PP P P P + P + PA P P P
Sbjct: 28 PAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGP 72
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/76 (25%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +2
Query: 581 PXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP-P 757
P P P+ P P P P PP P PS P + P P
Sbjct: 205 PFHPPPTPAWPHPGGNKWPPLPPFPSHPPPTPAWPQPGNKWPPLPPFPSHPPPTPAWPHP 264
Query: 758 STXXXSXPAXPSXPXP 805
P P P P
Sbjct: 265 GNQWPPLPPFPFHPPP 280
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/81 (23%), Positives = 23/81 (28%)
Frame = +2
Query: 575 PXPXXXRPXPSXPGXXXASIXPNTSXPXXXXXVXXRPXSXESXPPXPGXPSXXPXEXSXP 754
P P P P+ P P T + + P P P P P
Sbjct: 283 PAPAAAAPPPAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPPPAPPPPPP-----P 337
Query: 755 PSTXXXSXPAXPSXPXPXXXP 817
PS + P P P P P
Sbjct: 338 PSRFNNTTPKPPPPPPPPEPP 358
>03_02_0765 + 11000724-11002496
Length = 590
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = -3
Query: 882 GXGRGGXVSXRXWXGXXXXXXXGXXXGXGXEGXAGXDXXXVEGGXXXSXGXXEGXPGXGG 703
G G+GG + G G G G G G +GG G G G GG
Sbjct: 79 GGGKGGGLGGGGGLGGGGGAGGGFGGGLGHGGGLGGGFGGGKGGGLGGGGGLGGGAGGGG 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,410
Number of Sequences: 37544
Number of extensions: 157363
Number of successful extensions: 602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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