Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D17
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 347 LLRVSEEMFNADINNAFNYIQVNLQGKTXPMSRNDE 454
           +L++   + N  INN   Y Q N  G       N +
Sbjct: 463 MLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQ 498


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 347 LLRVSEEMFNADINNAFNYIQVNLQGKTXPMSRNDE 454
           +L++   + N  INN   Y Q N  G       N +
Sbjct: 188 MLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQ 223


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 190 LDQQSCDWSAR 222
           +D+Q+CDW  +
Sbjct: 75  IDKQTCDWKGK 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,614
Number of Sequences: 336
Number of extensions: 3011
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)