Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D16
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...   184   1e-46
03_01_0535 + 4006284-4006418,4006483-4006599,4007363-4007587,400...    44   1e-04
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711...    44   2e-04
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536...    42   9e-04
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800...    35   0.075
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394...    31   1.6  
02_05_0060 + 25484349-25484496,25485514-25485705,25486614-254869...    30   2.8  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score =  184 bits (447), Expect = 1e-46
 Identities = 91/151 (60%), Positives = 109/151 (72%), Gaps = 5/151 (3%)
 Frame = +1

Query: 274 FPAKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQ 453
           F A  E  R PR+++VG++Q+SIA+PT     +QKKAI  KVK +ID AG  GVNI+C Q
Sbjct: 83  FDADKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQ 142

Query: 454 -----ELWNXPFAFCTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKH 618
                E W  PFAFCTREK+ WCEFAE   DG +T FL++LA KY MVIVS ILERD  H
Sbjct: 143 VSQLSEAWTMPFAFCTREKR-WCEFAEP-VDGESTQFLQQLAKKYNMVIVSPILERDVNH 200

Query: 619 SDILWNTAVVISDTGNVIGKHRKNXIPRVGD 711
            +I+WNTAVVI + GN+IG HRKN IPRVGD
Sbjct: 201 GEIVWNTAVVIGNHGNIIGIHRKNHIPRVGD 231



 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = +2

Query: 725 YYMXGTXGHPVFATRYGXIAVTICFGRXHVLXWMMFGQNGAEIVF 859
           YYM G  GHPVF T YG I V IC+GR H L W+ FG NGAEIVF
Sbjct: 237 YYMEGNTGHPVFETAYGKIGVNICYGRHHPLNWLAFGLNGAEIVF 281


>03_01_0535 +
           4006284-4006418,4006483-4006599,4007363-4007587,
           4008112-4008205,4008587-4008661,4009045-4009123,
           4009385-4009400,4009441-4009584,4009822-4009904,
           4010012-4010093
          Length = 349

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
 Frame = +1

Query: 364 VNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNXPFAFCTREKQPWCEFAESDEDG--- 534
           V   K     + ++ I+ A   G  ++   E+WN P++        + E+AE  E G   
Sbjct: 55  VTADKARNIARAREAIEAAAAGGAKLVLLPEIWNGPYS-----NDSFPEYAEDIEAGGDA 109

Query: 535 -PTTXFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRK 687
            P+   + E+A    + +V   +   E+  + L+NT  V    G + GKHRK
Sbjct: 110 APSFSMMSEVARSLQITLVGGSIS--ERSGNKLYNTCCVFGSDGELKGKHRK 159


>02_04_0096 +
           19669428-19669525,19670770-19670818,19671041-19671132,
           19671235-19671386,19671478-19671524,19671617-19671650,
           19671769-19671935,19672070-19672166,19672239-19672408
          Length = 301

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 27/100 (27%), Positives = 54/100 (54%)
 Frame = +1

Query: 400 KKIIDVAGQEGVNIICFQELWNXPFAFCTREKQPWCEFAESDEDGPTTXFLRELAIKYAM 579
           +++I  A ++G NI+  QEL+   + FC  ++  + + A+  +  PT    ++LA +  +
Sbjct: 32  ERLIREAHKKGANIVLVQELFEGQY-FCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEV 90

Query: 580 VIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNXIP 699
           VI  S     E+ ++  +N+  +I   G  +G +RK+ IP
Sbjct: 91  VIPVSFF---EEANNAHYNSVAIIDADGTDLGLYRKSHIP 127



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 725 YYMXGTXGHPVFATRYGXIAVTICFGRXHVLXWMMFGQNGAEIVF 859
           Y+  G  G   F T+Y  I V IC+ +            GAEI+F
Sbjct: 137 YFNPGDTGFKAFKTKYATIGVGICWDQWFPECARAMVLQGAEILF 181


>06_01_0729 +
           5367796-5368071,5368390-5368483,5368708-5368782,
           5368919-5368997,5369155-5369170,5369260-5369346,
           5369451-5369533,5369616-5369769
          Length = 287

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +1

Query: 442 ICFQELWNXPFAFCTREKQPWCEFAESDEDG--PTTXFLRELAIKYAMVIVSSILERDEK 615
           + FQE+WN P++    E  P     E  + G  P+   L E+A +  + IV   +   E+
Sbjct: 16  VLFQEIWNCPYSM---ETLP--SHGEDIDGGASPSVSMLSEVAARRRITIVGGSIP--ER 68

Query: 616 HSDILWNTAVVISDTGNVIGKHRKNXIPRV---GDLT 717
            S  L+NT  VI   G +  KHRK  +  +   GD+T
Sbjct: 69  SSGRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDIT 105


>02_05_0058 +
           25478274-25478421,25478963-25479142,25479714-25480007,
           25480261-25480564,25480672-25480751,25480765-25480934
          Length = 391

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +1

Query: 514 AESDEDGPTTXFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRK 687
           A  D  GP    L  LA KY + +V  ++ER       L+NT +     G  +GKHRK
Sbjct: 104 AAIDVPGPEVTRLAALAGKYKIFLVMGVVERV---GYTLYNTVLFFDPLGKYLGKHRK 158


>04_04_0835 +
           28538032-28539006,28539113-28539203,28539291-28539448,
           28539543-28539594,28539707-28539786,28539890-28539983,
           28540078-28540633,28541160-28541259,28541576-28541617,
           28542445-28542588
          Length = 763

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 533 PSSSDSANSHHGCFSLVQNAKGXFHNSWKQMMLTPSW 423
           PS++ S N     F L++N      NSW Q+++T  W
Sbjct: 628 PSTTASVNLDESQFKLLRNCFQGTSNSWGQVIVTAGW 664


>02_05_0060 +
           25484349-25484496,25485514-25485705,25486614-25486907,
           25487140-25487421,25487571-25487743
          Length = 362

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +1

Query: 532 GPTTXFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRK 687
           GP    L  +A KY + +V  ++ER+      L+ + +     G  +GKHRK
Sbjct: 114 GPEVTRLAAMAGKYKVFLVMGVIERE---GYTLYCSVLFFDPLGRYLGKHRK 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,994,525
Number of Sequences: 37544
Number of extensions: 411024
Number of successful extensions: 1140
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)