Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D16
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   176   2e-44
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  176 bits (428), Expect = 2e-44
 Identities = 83/144 (57%), Positives = 103/144 (71%)
 Frame = +1

Query: 280 AKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQEL 459
           A+ EQTR PR+V+V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE 
Sbjct: 63  AQKEQTRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEA 122

Query: 460 WNXPFAFCTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKHSDILWNT 639
           W  PFAFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNT
Sbjct: 123 WTMPFAFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNT 182

Query: 640 AVVISDTGNVIGKHRKNXIPRVGD 711
           AVVIS TG VIG+ RKN IPRVGD
Sbjct: 183 AVVISHTGRVIGRSRKNHIPRVGD 206



 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +2

Query: 725 YYMXGTXGHPVFATRYGXIAVTICFGRXHVLXWMMFGQNGAEIVF 859
           YYM  T GHPVF T+YG I + IC+GR H   WMM+  NGAEI+F
Sbjct: 212 YYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGAEIIF 256


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 557 SRRKXVVGPSSSDSANSHHGCFSLVQNAKGXFHNSWKQMMLTPSWPATS 411
           SR K     +SS   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,123,034
Number of Sequences: 27780
Number of extensions: 326765
Number of successful extensions: 1028
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)