Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D13
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.0  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   9.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 35   TXLKTFXILVSSSETCHNSKCIPRCCYPAALLV 133
            T L+T  I +     CH    I  C YPA  LV
Sbjct: 1179 TNLQTIVISLKEEFYCHADVLIGICPYPAECLV 1211


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 486 TNLPV-QVNSSPW-RSHWPSLDDHRNWYCRLQALILWCRKPVRSV 358
           TNL V  +N++ + R+ +P L    N + +    +LW  KPVR +
Sbjct: 53  TNLNVITLNAAHFLRNTYPLLRPLINIFLKTDGSLLWKNKPVREL 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,679
Number of Sequences: 2352
Number of extensions: 14154
Number of successful extensions: 77
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)