Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D10
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496           31   1.2  
08_02_0729 + 20466352-20466506,20468137-20468395,20469368-204695...    29   5.0  
02_03_0075 + 14846108-14847794,14847858-14848249                       29   5.0  
06_03_1304 - 29187930-29188273,29188926-29189039,29189453-291897...    28   8.7  

>10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496
          Length = 389

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 212 MPSASTATTMPCQTYYARDAARTNQKNYCQRSDSGGDGWSGILL 343
           MP  +TATTMP  T+   DA            D+GG G  G++L
Sbjct: 304 MPGTATATTMPGTTF--TDAVPDTSMPMPMGGDAGGGGEEGVVL 345


>08_02_0729 +
           20466352-20466506,20468137-20468395,20469368-20469502,
           20470755-20470879,20471027-20471082,20471137-20471180,
           20471214-20471309
          Length = 289

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 238 HAVSNLLCEGCCTHKSKELLPAL*FWRRWVERHSTLVSVYQNRKRTGXYY 387
           HAV   L EGC  ++S   L  +    RW+   ST++ +   R   G ++
Sbjct: 198 HAVGARLKEGCHINRSLLTLTTVIRELRWITSFSTILMLLAGRSLNGFFF 247


>02_03_0075 + 14846108-14847794,14847858-14848249
          Length = 692

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 323 GWSGILLWCPFTKTESVQGNIMRKASLKIGPTKW 424
           GW  +L   PF +   V G++    SLK G   W
Sbjct: 123 GWESVLYIWPFIRDTQVGGSLCFTLSLKTGSADW 156


>06_03_1304 -
           29187930-29188273,29188926-29189039,29189453-29189722,
           29190098-29190234,29190483-29191159
          Length = 513

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
 Frame = +2

Query: 26  IGNSLRFKLLGRKSHFSHSCCDSYEFRDNKFCLSP--R*EHYEPMRXXXXXXXXXXXXXX 199
           +GNSL F+    K H  + C D    R      SP     H EP+               
Sbjct: 85  LGNSLEFRFASVKGHGKNMCKDGEAGRVEDSGTSPAVAVSHGEPVIGLKLGKRTYFENVC 144

Query: 200 XXXXMPSASTATTMPCQTYYARD---AARTNQKNYCQ 301
               + S+S A+ + C +   +    + ++ Q +YCQ
Sbjct: 145 GGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQ 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,111,484
Number of Sequences: 37544
Number of extensions: 283212
Number of successful extensions: 841
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)