BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_D10
(892 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 25 2.3
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 25 3.1
AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding pr... 24 5.4
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 9.4
DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein O-fucosylt... 23 9.4
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 25.4 bits (53), Expect = 2.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 421 MARKGLFQSVPAASLQDNQHA 483
+AR+ LF++VPAA+ QHA
Sbjct: 221 LARERLFRNVPAAAGWQRQHA 241
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 25.0 bits (52), Expect = 3.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 257 YARDAARTNQKNYCQRSDSGGDGWSGILLWCP 352
Y R R + ++ C++ +SGG+ ++ CP
Sbjct: 1004 YRRCILREDVEDRCRKCNSGGESIEHVIAGCP 1035
>AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP5 protein.
Length = 156
Score = 24.2 bits (50), Expect = 5.4
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -3
Query: 245 TAWWWRW 225
+ WWWRW
Sbjct: 6 SCWWWRW 12
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 9.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 236 WWRWRR 219
WWRWRR
Sbjct: 9 WWRWRR 14
>DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein
O-fucosyltransferase 1 protein.
Length = 399
Score = 23.4 bits (48), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 38 LRFKLLGRKSHFSHSCCDSY 97
L +LGR +HF +C SY
Sbjct: 339 LDLAILGRANHFIGNCISSY 358
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,638
Number of Sequences: 2352
Number of extensions: 10375
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -