Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D10
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical pr...    32   0.48 
AF067616-8|AAC19190.1|   90|Caenorhabditis elegans Hypothetical ...    31   0.84 

>Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical
           protein R17.3 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 212 MPSASTATTMPCQTYYARDAARTNQKNYCQRSDSGGDGW 328
           +P+ ST      QT++ R   RT ++ Y    +S GDG+
Sbjct: 45  LPTVSTIHNEEAQTFHQRPTVRTEKEYYTPHYESSGDGY 83


>AF067616-8|AAC19190.1|   90|Caenorhabditis elegans Hypothetical
           protein F29C4.2 protein.
          Length = 90

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 261 RGMLHAQIKRTIASALILAAMGGAAFYFGVRLPKQKAY 374
           R MLH   +R I  +LI +    AAF+FG   P+ + Y
Sbjct: 8   RNMLHQYGRRAIGISLIASVGATAAFFFGYVQPRHEKY 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,110,693
Number of Sequences: 27780
Number of extensions: 230389
Number of successful extensions: 577
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)