Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_D08
(871 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 67 4e-12
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 7e-09
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 52 1e-07
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 50 6e-07
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 42 9e-05
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 41 2e-04
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 32 0.092
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.65
SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|ch... 29 0.86
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 26 6.1
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 66.9 bits (156), Expect = 4e-12
Identities = 32/89 (35%), Positives = 48/89 (53%)
Frame = +2
Query: 176 KASDALKPRLAEAGXKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXX 355
+ SD+ + + KLVV+DF ATWCGPCK I PK ++ +
Sbjct: 4 QVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQF-SNTYSDATFIKVDVDQLSE 62
Query: 356 XASEYNINSMPTFVFVKNGKKLDEFSGAN 442
A+E +++MP+F KNG+K++E GAN
Sbjct: 63 IAAEAGVHAMPSFFLYKNGEKIEEIVGAN 91
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.0 bits (129), Expect = 7e-09
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 227 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX-ASEYNINSMPTFVFV 403
+ +D A WCGPCK I P ++A++ AS + +MPTFVF
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 404 KNGKKLDEFSGAN 442
+NGK++D +GAN
Sbjct: 82 ENGKQIDMLTGAN 94
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 52.0 bits (119), Expect = 1e-07
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +2
Query: 221 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 400
K+ V+DF A WCGPCK + P L+++ +E A + + ++PT V
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFSDIAQKNGVYALPTMVL 94
Query: 401 VKNGKKLDEFSGANV 445
+ G++LD GA+V
Sbjct: 95 FRKGQELDRIVGADV 109
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 49.6 bits (113), Expect = 6e-07
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 221 KLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTFV 397
K++++ F A WCG CK + P+ + A E+ SEY+I PT
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLN 99
Query: 398 FVKNGKKLDEFSG 436
KNGK++ ++SG
Sbjct: 100 VFKNGKQISQYSG 112
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 221 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 400
K V+++F A WCG CK + P +++A E S +I+ PT +F
Sbjct: 374 KDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS-VSISGFPTIMF 432
Query: 401 VKNGKKLD 424
K K++
Sbjct: 433 FKANDKVN 440
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 221 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 400
++++++F A W PCK + D+ A + A +++N++P FV
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDI-AESFDVNAVPLFVL 79
Query: 401 VKNGKKLDEFSGAN 442
+ K L SGAN
Sbjct: 80 IHGAKVLARISGAN 93
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 212 AGXKLVVIDFMATWCGPCKMIGPKLDEIAA--EMXXXXXXXXXXXXXXXXXASEYNINSM 385
A K +I+F ATWCG CK + P +E+ A E A +Y+I
Sbjct: 37 ASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGF 96
Query: 386 PTFV-FVKNGKKLDEFSGA 439
PT + F +G + ++S A
Sbjct: 97 PTLIWFPPDGSEPVQYSNA 115
Score = 30.3 bits (65), Expect = 0.37
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 221 KLVVIDFMATWCGPCKMIGPKLDEI 295
K V+++F A WCG CK + P + +
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETL 183
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 32.3 bits (70), Expect = 0.092
Identities = 30/120 (25%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Frame = +2
Query: 92 LSCFFLCIFNCVSS-FSFQFLLPKLSXHXKASDALKPRLAEAGXKLVVIDFMATWCGPCK 268
L FL F+ VS F + + + + + K A+ G LVV F A WCG CK
Sbjct: 8 LFTLFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAK-GPSLVV--FYAPWCGYCK 64
Query: 269 MIGPKLDEIAAEMXXXXXXXXXXXXXXXXXA--SEYNINSMPTFVFVKNGKKLDEFSGAN 442
+ P ++A+ + A S+Y + PT V K S +
Sbjct: 65 KLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.5 bits (63), Expect = 0.65
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2
Query: 254 CGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 424
CG CK +GP D E A E +S NI ++PT +NG+ ++
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Query: 425 E 427
E
Sbjct: 114 E 114
>SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 522
Score = 29.1 bits (62), Expect = 0.86
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 24 YSGLLXYFFASYRLA--PXCLSVVTCRVSFFAFSTVSL 131
YS + F+A Y +A P + + CR+S+F F V L
Sbjct: 114 YSSMTTLFYAGYLVAQYPAAILMQKCRLSYFIFCNVFL 151
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 609 NIFKFITDVKNIFSSFIKNVYMFFFFLIPFS 517
N ++TD +NIF +F+ N + F P +
Sbjct: 76 NSIDYLTDTQNIFPNFVNNENNYQFSTAPLN 106
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,942,123
Number of Sequences: 5004
Number of extensions: 55532
Number of successful extensions: 141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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