Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_D03
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.19 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   9.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 308 MNCMEYAYQLWLQGLQGHRPGLFPS*VQTYLRRK 409
           +N M Y  +    G+ GH  GL+PS V T   +K
Sbjct: 202 INVMAYDLRGSWDGVTGHHSGLYPSAVDTTTNQK 235


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
          transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 16 RLTYSWPSLKTFA 54
          R+TYSW  +  FA
Sbjct: 56 RITYSWTEINAFA 68


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
          transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 16 RLTYSWPSLKTFA 54
          R+TYSW  +  FA
Sbjct: 56 RITYSWTEINAFA 68


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 116 LCLFVASLY-AAXSDVPNDILEEQLYN 193
           L +FV  +Y A+  + PN +   +LYN
Sbjct: 330 LSVFVILVYYASLDETPNPVTNGKLYN 356


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 295 TKQQDELHGVRLSTLAPGAPRTSSGIVSQLSSDLSSPKTRLS 420
           T  +D+   +  S  +PGA    S + S     L SP T ++
Sbjct: 668 TPPEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVA 709


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 295 TKQQDELHGVRLSTLAPGAPRTSSGIVSQLSSDLSSPKTRLS 420
           T  +D+   +  S  +PGA    S + S     L SP T ++
Sbjct: 560 TPPEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVA 601


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 328 LSTLAPGAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVS 444
           LST +      SSG+ S LS   S P    +  TS  +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLS 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,550
Number of Sequences: 336
Number of extensions: 1939
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)