Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C21
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    30   0.020
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    30   0.020
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    25   1.00 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.7  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   4.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   4.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +1

Query: 73  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 228
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +1

Query: 73  WWFIFLKMASVATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVE 228
           W   FLK+ ++ TV   +LG  V++K   +  TSQ  IK   T +Y N K++
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLFMTSQ--IKKNVTRAYCNKKID 104


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 480 LQLWETHHCRCXWFRSWGWL*AGN 551
           L++   HHCR  +  S GW  AG+
Sbjct: 69  LEMTLAHHCRFKFSSSVGWSPAGH 92


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 559 RTALPAHNHPQE 524
           RT LP H HPQ+
Sbjct: 374 RTNLPTHRHPQD 385


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 569 MPAKRRNSVXPRSTLAPSPEPEAPSVFPDTLASRK 673
           +P +  ++    S  +PS  PE  SV P +L  R+
Sbjct: 202 IPQRTASTASSASNYSPSQSPEPESVRPLSLVVRR 236


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 695 PVNTXSXAFDLPTYLGRRWVPPAPGMVP 612
           P++T S   D   +     +PP PG+ P
Sbjct: 211 PISTSSLPSDFYRFSPTGLIPPHPGLSP 238


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 695 PVNTXSXAFDLPTYLGRRWVPPAPGMVP 612
           P++T S   D   +     +PP PG+ P
Sbjct: 103 PISTSSLPSDFYRFSPTGLIPPHPGLSP 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,903
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)