BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C21
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 226 2e-59
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 187 8e-48
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 109 2e-24
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 100 3e-21
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 96 2e-20
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 83 3e-16
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 79 5e-15
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 68 1e-11
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 64 2e-10
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 30 1.8
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 226 bits (552), Expect = 2e-59
Identities = 111/203 (54%), Positives = 139/203 (68%)
Frame = +1
Query: 139 VLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVEL 318
++ K+ + +Q + +S+ + E IK+E VG K+NV LI+LNRPKALNALC L EL
Sbjct: 8 LVRNAKLCANVNQMQVAAFSSKAPEMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTEL 67
Query: 319 GKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWEDISNCGKP 498
A+ D D ++ AI+ITG+E+AFAAGADIKEM NN +++ FL W +S+ KP
Sbjct: 68 ADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKP 127
Query: 499 IIAAVXGFALGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAX 678
+IAAV GFALGGG ELAM+CDIIYAGEKA+FG PEINIGTIPGAGGTQR R GKS A
Sbjct: 128 VIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAM 187
Query: 679 XXVLTGXFFDAHXXXXMGLVXKV 747
LTG A G+V K+
Sbjct: 188 EVCLTGNHVTAQEAKEHGIVSKI 210
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 187 bits (456), Expect = 8e-48
Identities = 93/177 (52%), Positives = 117/177 (66%)
Frame = +1
Query: 217 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFA 396
I + G+ +NV LI LNRP ALNALC+ L +EL + + + D + I++TG+EKAFA
Sbjct: 2 ITLSRTGAAENVALITLNRPSALNALCRELMLELSENLLKVEKDQSYHVIVLTGSEKAFA 61
Query: 397 AGADIKEMXNNTYSSNTKQGFLREWEDISNCGKPIIAAVXGFALGGGCELAMLCDIIYAG 576
AGADIKEM ++ + + W+ +S+ KP+IAAV GFALGGG ELA++CDI+YAG
Sbjct: 62 AGADIKEMAKLEFADVFENDYFTNWDTLSHITKPVIAAVNGFALGGGTELALMCDIVYAG 121
Query: 577 EKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFFDAHXXXXMGLVXKV 747
E A FG PEI IGTIPG GGTQR PRYV KS A L+G A GLV KV
Sbjct: 122 ENAIFGQPEITIGTIPGLGGTQRWPRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKV 178
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 109 bits (263), Expect = 2e-24
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = +1
Query: 229 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGA 405
+ G + + ++ +NRP N+L + + + +++ D +I+ + F +GA
Sbjct: 35 LTGKDEGITILNMNRPAKKNSLGRVFMDQFREVLDELKYDPKTRVVILNSKCDNVFCSGA 94
Query: 406 DIKEMXNNTYSSNTK--QGFLREWEDISNCGKPIIAAVXGFALGGGCELAMLCDIIYAGE 579
D+KE + T+ G + D+ +P+IAA+ GFALGGG ELA+ CDI A +
Sbjct: 95 DLKERKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAIDGFALGGGLELALACDIRVASQ 154
Query: 580 KAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFFDAHXXXXMGLVXKVXQ 753
KAK G E IPGAGG+QRL R VG +KA + T + +G+V V +
Sbjct: 155 KAKMGLVETKWALIPGAGGSQRLYRIVGVAKAKELIYTAEVLNGADAAKLGVVNHVVE 212
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 99.5 bits (237), Expect = 3e-21
Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Frame = +1
Query: 181 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 357
S + +S +++ V + +V +++++ P N L K LF E+ + ++ +D ++
Sbjct: 18 SFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAEMNETLDRLQSDQSV 77
Query: 358 AAIII-TGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWED----ISNCGKPIIAAVXGF 522
AI++ +G +F AGADI +M ++ LRE + I KPI+AA+ G
Sbjct: 78 KAIVVMSGKPNSFVAGADI-QMFKAEKTAAGVSNLLREGQKQLLTIELSQKPIVAAIMGS 136
Query: 523 ALGGGCELAMLCD--IIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTG 696
+GGG E+A+ C I +K G PE+ +G +PG GGTQRLP+ LTG
Sbjct: 137 CMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTG 196
Query: 697 XFFDAHXXXXMGLVXKVXQ 753
A+ +G+V +V Q
Sbjct: 197 KRIKANKAMKIGIVDRVIQ 215
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 96.3 bits (229), Expect = 2e-20
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Frame = +1
Query: 181 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 357
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 44 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 103
Query: 358 AAIII-TGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWED----ISNCGKPIIAAVXGF 522
+I++ +G +F AGADI +M ++ + RE ++ I KP++AA+ G
Sbjct: 104 KSIVVMSGKPNSFVAGADI-QMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGS 162
Query: 523 ALGGGCELAMLCD--IIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTG 696
+GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+ LTG
Sbjct: 163 CMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTG 222
Query: 697 XFFDAHXXXXMGLVXKVXQ 753
A +G+V +V Q
Sbjct: 223 KKIKADKAKKIGIVDRVIQ 241
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 96.3 bits (229), Expect = 2e-20
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Frame = +1
Query: 181 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 357
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 18 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 77
Query: 358 AAIII-TGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWED----ISNCGKPIIAAVXGF 522
+I++ +G +F AGADI +M ++ + RE ++ I KP++AA+ G
Sbjct: 78 KSIVVMSGKPNSFVAGADI-QMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGS 136
Query: 523 ALGGGCELAMLCD--IIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTG 696
+GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+ LTG
Sbjct: 137 CMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTG 196
Query: 697 XFFDAHXXXXMGLVXKVXQ 753
A +G+V +V Q
Sbjct: 197 KKIKADKAKKIGIVDRVIQ 215
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 96.3 bits (229), Expect = 2e-20
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Frame = +1
Query: 181 SIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKAL-NALCKPLFVELGKAVNDFDADSNI 357
S + +S ++ V + +V +++++ P N L K LF E+ ++ +D +I
Sbjct: 44 SFRLFSQSAPAMQTTHRVEKQGDVAVVKIDLPNTKENVLNKALFAEMKATLDKLQSDESI 103
Query: 358 AAIII-TGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWED----ISNCGKPIIAAVXGF 522
+I++ +G +F AGADI +M ++ + RE ++ I KP++AA+ G
Sbjct: 104 KSIVVMSGKPNSFVAGADI-QMIKAEGTATATETLSREGQEQFFRIEKSQKPVVAAIMGS 162
Query: 523 ALGGGCELAMLCD--IIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTG 696
+GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+ LTG
Sbjct: 163 CMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTG 222
Query: 697 XFFDAHXXXXMGLVXKVXQ 753
A +G+V +V Q
Sbjct: 223 KKIKADKAKKIGIVDRVIQ 241
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 93.9 bits (223), Expect = 1e-19
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Frame = +1
Query: 241 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNE-KAFAAGADIKE 417
K NV + LNRPK NAL + +F++L ND D +IA ++ TG + K + AG+D
Sbjct: 11 KNNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGSDFSP 70
Query: 418 MXNNTYSSNTKQGFLREWEDISNCGKPIIAAVXGFALGGGCELAMLCDIIYAGEKAKFGX 597
+T + + G+ + + KPIIA V G A+G + + D + A + A F
Sbjct: 71 AELSTLTDIQEHGYKLFVDILIAFPKPIIALVNGHAVGVSVTMLGVMDAVIAIDTATFAT 130
Query: 598 PEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFFDAHXXXXMGLVXKVXQXXNF 765
P +IG P A + LPR +G KA ++ F AH GLV ++ F
Sbjct: 131 PFADIGVCPEACSSYTLPRIMGHQKAAALMMFSEKFTAHEAHIAGLVTQILPAATF 186
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 82.6 bits (195), Expect = 3e-16
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Frame = +1
Query: 250 VGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMXNN 429
V LI +NR N + ++L A F+ DS + ++ G F AG D+ E +
Sbjct: 15 VFLIGINRANKKNCVNHATALQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDL-ESVSK 73
Query: 430 TYSSNTKQGFLREWE----DISNCGKPIIAAVXGFALGGGCELAMLCDIIYAGEKAKFGX 597
+ F ++ I KP+IAA+ GFA+ GG EL+++ D+ + AKFG
Sbjct: 74 AEHQEVSEDFCDKYRYMGPSIMKIKKPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGV 133
Query: 598 PEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFFDAHXXXXMGLVXKV 747
+G GGT RLPR +G +A +LTG A GLV ++
Sbjct: 134 FCRRVGVPLIDGGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRI 183
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 79.4 bits (187), Expect = 3e-15
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Frame = +1
Query: 199 TASYENIKVEVVGSKKNVG----LIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAI 366
++ Y ++K+ V KNVG + LNRP NAL ++ E+G D D +
Sbjct: 2 SSKYNSLKLVKV---KNVGDFVYKVSLNRPSKFNALNMVIWKEIGDCFQLIDEDPECRVV 58
Query: 367 IITGNEKAFAAGADIKE---MXNNTYSSNTKQG--------FL-REWEDISNCGKPIIAA 510
I+ G K F +G D+ E + + ++G F+ +++ I C KP+I A
Sbjct: 59 ILQGEGKHFCSGLDLSEVTFLNGEEADDSARRGRSILRTIKFMQKQFTYIDECSKPVILA 118
Query: 511 VXGFALGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXV- 687
+ G+ LG ++A CD+ A + A E++IG G RLP+ VG +
Sbjct: 119 MHGYCLGAALDIATACDVRVATKDAVLSVKEVDIGMAADVGTLNRLPKIVGNHSWIKDIS 178
Query: 688 LTGXFFDAHXXXXMGLVXKV 747
L+ F A GL+ +V
Sbjct: 179 LSARHFSAGEALQFGLLSRV 198
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 78.6 bits (185), Expect = 5e-15
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Frame = +1
Query: 175 QASIKFYSTA-SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADS 351
Q S + ST+ + ++ ++ V + V ++LNRP LN ++ E KA++ D
Sbjct: 10 QISSRALSTSPALKSSEISVKEERPYVYNVKLNRPAKLNTFTMDMWREFKKAIDSLADDP 69
Query: 352 NIAAIIITGNEKAFAAGADIKE--------MXNNTYSSNTK----QGFLREWED----IS 483
+III+G KAF AG DI + ++T K + F+ E +D +
Sbjct: 70 KCRSIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTALE 129
Query: 484 NCGKPIIAAVXGFALGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVG 663
C KPIIA++ LG G +L CDI A + A F E+++G G R+ + VG
Sbjct: 130 RCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIFSIREVDVGLAADIGTLNRIQKVVG 189
Query: 664 K-SKAXXXVLTGXFFDAHXXXXMGLVXKV 747
S T F A GL+ ++
Sbjct: 190 NDSWTRDVAFTARDFGADEALRFGLISRI 218
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 71.3 bits (167), Expect = 8e-13
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Frame = +1
Query: 196 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 375
S A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 6 SAAAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILK 62
Query: 376 GN-EKAFAAGADIKEMXNNTYSSNT-------KQGFLREW---EDISNCGKPIIAAVXGF 522
G+ +KAF AG D+ + + S + K F E+ I K + + G
Sbjct: 63 GSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGI 122
Query: 523 ALGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVG 663
+GGGC L++ A EK PE +G P GG+ L R G
Sbjct: 123 VMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG 169
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 71.3 bits (167), Expect = 8e-13
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Frame = +1
Query: 196 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 375
S A+ I V+ GSKK ++ LNRPKALNAL + E + +++ S++ +I+
Sbjct: 29 SAAAKSEILVDTHGSKK---VVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILK 85
Query: 376 GN-EKAFAAGADIKEMXNNTYSSNT-------KQGFLREW---EDISNCGKPIIAAVXGF 522
G+ +KAF AG D+ + + S + K F E+ I K + + G
Sbjct: 86 GSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGI 145
Query: 523 ALGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVG 663
+GGGC L++ A EK PE +G P GG+ L R G
Sbjct: 146 VMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG 192
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 67.7 bits (158), Expect = 1e-11
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Frame = +1
Query: 175 QASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSN 354
++S++ +ST+ +E + N + + K +N L + EL + D
Sbjct: 3 KSSLRAFSTSKAARTLLERELYQGNSVVRFILNDKKVNTLSLAMINELFAELKAIDKIEK 62
Query: 355 IAAIIITGNEKAFAAGADIKEMXNNTYSSNTKQGFLR---EWEDISNCGKPIIAAVXGFA 525
+ ++II N K+F+AG ++KE+ + S + F I N P+IA V G A
Sbjct: 63 VRSVIIAHNGKSFSAGHELKELTTESGSDKHNEIFNTCGDMMNFIRNMKVPVIAEVNGTA 122
Query: 526 LGGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFF 705
G +L CD++ AG+ +KF P +G G L R V + A +LT
Sbjct: 123 AAAGLQLVASCDVVVAGKSSKFLVPGQKLGLFCSTPGI-ALVRAVPRKVAMDMLLTAQPI 181
Query: 706 DAHXXXXMGLVXKVXQ 753
D+ GLV +V +
Sbjct: 182 DSEAALRSGLVSRVVE 197
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 63.7 bits (148), Expect = 2e-10
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Frame = +1
Query: 196 STASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIIT 375
S EN+ V + V I LNRPK NAL ++ + KA+ + D + + +IT
Sbjct: 119 SIEGLENVDGLSVTREGKVFKIALNRPKKFNALTLEMYQGIQKALEVSNNDKSTSITVIT 178
Query: 376 GNEKAFAAGADI---KEMXNNTYS-----SNTKQGFLREWED-ISNCGKPIIAAVXGFAL 528
N + AG D+ K T +NT + ++++ + N KP+IA + G A+
Sbjct: 179 ANGSYYCAGNDLTNFKAAAGGTKEQIADMANTAKVIMKDYVNAYINHEKPLIALINGPAV 238
Query: 529 GGGCELAMLCDIIYAGEKAKFGXPEINIGTIPGAGGTQRLPRYVGKSKAXXXVLTGXFFD 708
G + + D + A +KA F P +G P + P +G +A +L
Sbjct: 239 GIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMGSLRASEMLLVCKKIS 298
Query: 709 AHXXXXMGLVXKVXQXXNFXXXXQ 780
A GLV +V F Q
Sbjct: 299 AQTAKDYGLVNEVVPDAEFQSHAQ 322
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 53.6 bits (123), Expect = 2e-07
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 3/164 (1%)
Frame = +1
Query: 265 LNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD---IKEMXNNTY 435
L+RP+ N L + + G+ F D N A I+++G K+F +GAD IK++ +
Sbjct: 40 LDRPEKNNCLSGEMMKQFGEHTELFSDDQN-AIIVVSGVGKSFCSGADLGLIKDISDQKL 98
Query: 436 SSNTKQGFLREWEDISNCGKPIIAAVXGFALGGGCELAMLCDIIYAGEKAKFGXPEINIG 615
+ + + IA + G ALGG E+ DI A +K + +G
Sbjct: 99 GVQMFEYMSSILSLLHSSPAISIAKIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMG 158
Query: 616 TIPGAGGTQRLPRYVGKSKAXXXVLTGXFFDAHXXXXMGLVXKV 747
+P GG + + +G+ +A + A G V V
Sbjct: 159 IVPSWGGAEYMEGIMGRGRALAAMGRANVMSAEEAKDQGYVDYV 202
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 DADSNIAAIIITGNEKAFAAGADIKEMXNNTYSSNTKQGFLREWEDIS--NCGKPI 501
D D + I+ N K + +K++ NT+ + L++WE + + GKP+
Sbjct: 26 DTDKKFSGQIVASNGKKSERWSYLKKLQKNTFQQKADECGLKDWEITTWDDAGKPV 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,200,398
Number of Sequences: 27780
Number of extensions: 353819
Number of successful extensions: 1076
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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