Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C20
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 116 8e-26
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 116 8e-26
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 116 8e-26
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 116 8e-26
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 60 8e-09
AF298548-1|AAG15254.1| 1429|Homo sapiens caspase recruitment dom... 31 4.1
BC051787-1|AAH51787.1| 1375|Homo sapiens NLRP1 protein protein. 31 5.4
AF310105-1|AAG30288.1| 1429|Homo sapiens NALP1 protein. 31 5.4
AF229062-1|AAK00751.1| 1443|Homo sapiens NAC-delta splice varian... 31 5.4
AF229061-1|AAK00750.1| 1399|Homo sapiens NAC-gamma splice varian... 31 5.4
AF229060-1|AAK00749.1| 1473|Homo sapiens NAC-beta splice variant... 31 5.4
AF229059-1|AAK00748.1| 1429|Homo sapiens NAC-alpha splice varian... 31 5.4
AB023143-1|BAA76770.2| 1447|Homo sapiens KIAA0926 protein protein. 31 5.4
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 54 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 113
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 114 ARREAKVKFEERYKTGKNKWFFQKLRF 140
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/42 (52%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
Frame = +1
Query: 118 LVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
LVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 57
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 39 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 116 bits (280), Expect = 8e-26
Identities = 57/87 (65%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 407
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 408 LRFNTRVRFEERYKSGKNKWFFQKLRF 488
R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTS++ A+ A + R+ R+V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKV 53
Score = 37.1 bits (82), Expect = 0.082
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 188 NKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 298
++PY HA VAGIDRYPR GK+ + + K+F
Sbjct: 35 DRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 71
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 60.5 bits (140), Expect = 8e-09
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +3
Query: 375 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 488
KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40
>AF298548-1|AAG15254.1| 1429|Homo sapiens caspase recruitment domain
protein 7 protein.
Length = 1429
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVHKRM 257
G +WP+ + G E+R R S G P GTP + H +
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAHSSL 248
>BC051787-1|AAH51787.1| 1375|Homo sapiens NLRP1 protein protein.
Length = 1375
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AF310105-1|AAG30288.1| 1429|Homo sapiens NALP1 protein.
Length = 1429
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AF229062-1|AAK00751.1| 1443|Homo sapiens NAC-delta splice variant
protein.
Length = 1443
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AF229061-1|AAK00750.1| 1399|Homo sapiens NAC-gamma splice variant
protein.
Length = 1399
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AF229060-1|AAK00749.1| 1473|Homo sapiens NAC-beta splice variant
protein.
Length = 1473
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AF229059-1|AAK00748.1| 1429|Homo sapiens NAC-alpha splice variant
protein.
Length = 1429
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 203 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 245
>AB023143-1|BAA76770.2| 1447|Homo sapiens KIAA0926 protein protein.
Length = 1447
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 120 GPKWPVRGSQGYRSQELRRRYLRTSHTGMPSSLVSTGTPGKVH 248
G +WP+ + G E+R R S G P GTP + H
Sbjct: 221 GTQWPLDETSGIYYTEIREREREKSEKGRPPWAAVVGTPPQAH 263
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,887,184
Number of Sequences: 237096
Number of extensions: 1800321
Number of successful extensions: 3344
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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