Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C20
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p pro...   138   1e-32
AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA...   138   1e-32
AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-P...    33   0.67 
AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    29   8.3  
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    29   8.3  
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    29   8.3  

>AY070827-1|AAL48449.1|  135|Drosophila melanogaster AT27980p
           protein.
          Length = 135

 Score =  138 bits (333), Expect = 1e-32
 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +3

Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKL 410
           P KV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  
Sbjct: 50  PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109

Query: 411 RFNTRVRFEERYKSGKNKWFFQKLRF 488
           RF TRV+FE  YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135



 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 85  MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
           M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT E+    A+ A + R+ R+V
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKV 53



 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +2

Query: 185 PNKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAFRQGCKLQSLDANTL 340
           P KP+GHA VAGIDRYPR   ++ GK    ++ + K F     L+SL+ N L
Sbjct: 34  PEKPFGHALVAGIDRYPRKVTKKMGKNKLKKKSKVKPF-----LKSLNYNHL 80


>AE014297-3837|AAF56495.1|  135|Drosophila melanogaster CG4759-PA
           protein.
          Length = 135

 Score =  138 bits (333), Expect = 1e-32
 Identities = 63/86 (73%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +3

Query: 234 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKL 410
           P KV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT  D SFEK S KDLKDP KRK  
Sbjct: 50  PRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTH 109

Query: 411 RFNTRVRFEERYKSGKNKWFFQKLRF 488
           RF TRV+FE  YK GKNKWFFQKLRF
Sbjct: 110 RFQTRVKFESVYKEGKNKWFFQKLRF 135



 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = +1

Query: 85  MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQ----AIRACLRRWYRQV 231
           M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT E+    A+ A + R+ R+V
Sbjct: 1   MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKV 53



 Score = 42.7 bits (96), Expect = 6e-04
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +2

Query: 185 PNKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAFRQGCKLQSLDANTL 340
           P KP+GHA VAGIDRYPR   ++ GK    ++ + K F     L+SL+ N L
Sbjct: 34  PEKPFGHALVAGIDRYPRKVTKKMGKNKLKKKSKVKPF-----LKSLNYNHL 80


>AE013599-1694|AAF58382.1|  506|Drosophila melanogaster CG17050-PA
           protein.
          Length = 506

 Score = 32.7 bits (71), Expect = 0.67
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 330 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 416
           P  Y  +F FE+F  KDL+  AK K L+F
Sbjct: 60  PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88


>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 70  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAIRAC-LRR 216
           E+     + + PG V+++L+GR+ G++ +++K    G    T   A+ +C LRR
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRR 158


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 70  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAIRAC-LRR 216
           E+     + + PG V+++L+GR+ G++ +++K    G    T   A+ +C LRR
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRR 158


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
 Frame = +1

Query: 70  EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAIRAC-LRR 216
           E+     + + PG V+++L+GR+ G++ +++K    G    T   A+ +C LRR
Sbjct: 86  EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRR 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,045,290
Number of Sequences: 53049
Number of extensions: 517285
Number of successful extensions: 1278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)