Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C18
(931 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.028
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.072
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.38
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.51
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.51
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 0.64
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 0.72
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 0.89
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 26 1.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 2.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.3
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 29 6.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.3
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.3
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 29 6.3
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 6.3
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 6.3
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 6.3
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 24 8.3
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.3
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 8.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.3
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 24 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXX--PX-WXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
PP G P G P P PP PPPP C PPPP GG PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-PPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P PP PP PPPP GG PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
PP G P G P PP PPP PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXX--PX-WXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
PP G P G P P PP PPPP C PPPP GG PP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-PPPPPPPPPGGFKGGPPPP 787
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P PP PP PPPP GG PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
PP G P G P PP PPP PPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXX--PX-WXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
PP G P G P P PP PPPP C PPPP GG PP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-PPPPPPPPPGGFKGGPPPP 370
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P PP PP PPPP GG PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPP-PPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
PP G P G P PP PPP PPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 382 PPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
PP PP P APPPP GG PP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 31.5 bits (68), Expect(2) = 0.028
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 381 APXXPPPPXFXLXGPPPP 434
AP PPPP L GPPPP
Sbjct: 575 APPPPPPPPPMLGGPPPP 592
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 382 PPXXPPPPXXCWXAPPPP 435
PP PPPP PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPPP 593
Score = 23.8 bits (49), Expect(2) = 0.028
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 589 PPPPPPP 595
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 35.1 bits (77), Expect = 0.072
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
PP P P P P PP PPP C PPPP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
PP P P P + P PP PPPP PPPP
Sbjct: 41 PPLPCPPPPICPP--QFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
GGGG + GGG GG G + G G WG GG
Sbjct: 53 GGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGG 94
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 SPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP--XXXXXXXGGXKPP 474
SPP P P G P P P PPP PPPP GG PP
Sbjct: 236 SPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 PPXGXPQTPX-GXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P P PPP PPPP G PP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 SPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP--XXXXXXXGGXKPP 474
SPP P P G P P P PPP PPPP GG PP
Sbjct: 257 SPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 PPXGXPQTPX-GXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P P PPP PPPP G PP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 SPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP--XXXXXXXGGXKPP 474
SPP P P G P P P PPP PPPP GG PP
Sbjct: 242 SPPP--PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +1
Query: 310 PPXGXPQTPX-GXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
P G P P G P P P PPP PPPP G PP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect(2) = 0.64
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +3
Query: 381 APXXPPPPXFXL--XGPPPP 434
AP PPPP + GPPPP
Sbjct: 535 APTPPPPPPVGMANGGPPPP 554
Score = 23.8 bits (49), Expect(2) = 0.64
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 578 PPPPPPP 584
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect(2) = 0.72
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 313 PXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
P P P P P PP PPPP PPPP
Sbjct: 48 PMPMPVCPPPPPCPAQFCPP---PPICPPPPPPPMPCPPPP 85
Score = 21.0 bits (42), Expect(2) = 0.72
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 553 PPPPPP 570
PPPPPP
Sbjct: 82 PPPPPP 87
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.5 bits (68), Expect = 0.89
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 382 PPXXPPPPXXCWXAPPPP 435
P PPPP C APPPP
Sbjct: 37 PACAPPPPPMCGCAPPPP 54
Score = 24.6 bits (51), Expect(2) = 2.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 369 PXLXAPXXPPPPXFXLXGPPPP 434
P A PPPP PPPP
Sbjct: 34 PAAPACAPPPPPMCGCAPPPPP 55
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 51 PPPPPPP 57
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 25.8 bits (54), Expect(2) = 1.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 369 PXLXAPXXPPPPXFXLXGPPP 431
P P PPPP GPPP
Sbjct: 32 PGPLRPWGPPPPWHRNRGPPP 52
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 80 PPPPPPP 86
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +1
Query: 301 FXSPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPP 474
F PP G P P P PPP + APPPP +PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -3
Query: 479 PXGGXXPPXXXXXXXGGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
P GG GGGG GG G GG + G F G G G GG
Sbjct: 311 PMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGG 367
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 382 PPXXPPPPXXCWXAPPPP 435
PP PPPP APPPP
Sbjct: 84 PPPPPPPPPPTLKAPPPP 101
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 382 PPXXPPPPXXCWXAPPPP 435
PP PPPP PPPP
Sbjct: 85 PPPPPPPPPTLKAPPPPP 102
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 307 SPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
SPP P P P K P P PPP P PP
Sbjct: 72 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 307 SPPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
SPP P P P K P P PPP P PP
Sbjct: 294 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
G GG+ + GGGG G G G G WG GG
Sbjct: 147 GWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGG 188
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
GGG + GG G GG G + G G WG GG
Sbjct: 188 GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGG 229
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -3
Query: 434 GGGGAXQXKXGGG-GXXGGXQXGXXXFFXKGXPXGVWGXPXGGEXKRXWXQK 282
GG GA GGG G GG G G G WG P + W Q+
Sbjct: 198 GGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQ 249
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
GGG + GG G GG G + G G WG GG
Sbjct: 226 GGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGG 267
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -3
Query: 434 GGGGAXQXKXGGG-GXXGGXQXGXXXFFXKGXPXGVWGXPXGGEXKRXWXQK 282
GG GA GGG G GG G G G WG P + W Q+
Sbjct: 236 GGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQ 287
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPPXGXXK 489
PP TP P P P PPP W PPPP P
Sbjct: 264 PPPPPSVTPMPPPMPPT---PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 490 KKKKXXXXFFFFFXXXXXXKXPPPPPP 570
+ F PPPPPP
Sbjct: 321 PPSR--------FGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 6/61 (9%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCW------XAPPPPXXXXXXXGGXKP 471
PP P P P P PPPP + PPPP GG P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Query: 472 P 474
P
Sbjct: 350 P 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPPXXXXXXXGGXKPPXGXXK 489
PP TP P P P PPP W PPPP P
Sbjct: 274 PPPPPSVTPMPPPMPPT---PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 490 KKKKXXXXFFFFFXXXXXXKXPPPPPP 570
+ F PPPPPP
Sbjct: 331 PPSR--------FGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 6/61 (9%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCW------XAPPPPXXXXXXXGGXKP 471
PP P P P P PPPP + PPPP GG P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Query: 472 P 474
P
Sbjct: 360 P 360
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +1
Query: 325 PQTPXGXPXXKXXXXPXWXP-PXXPPPPXXCWXAPPPPXXXXXXXG--GXKPP 474
P P P + P P P PPPP + PP P G G PP
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPP 161
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Frame = +1
Query: 325 PQTPXGXPXXKXXXXPXWXP-PXXPPPPXXCWXAPPPPXXXXXXXG--GXKPP 474
P P P + P P P PPPP + PP P G G PP
Sbjct: 109 PPMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPP 161
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 473 GGXXPPXXXXXXXGGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXG 312
GG PP GGG GGGG GG G G G G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 473 GGXXPPXXXXXXXGGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXG 312
GG PP GGG GGGG GG G G G G G
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = -3
Query: 491 FFXXPXGGXXPPXXXXXXXGGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXG 312
FF GG P GGGG + GGG GG + G + G WG G
Sbjct: 35 FFGGRSGGWGRPGW-----GGGGPGWGRGGGGSGWGGGRGGG---WGNNGGGGNWGGNGG 86
Query: 311 G 309
G
Sbjct: 87 G 87
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 310 PPXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPP 432
PP PQ P P PP PPP + PPP
Sbjct: 113 PPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 384 PXXPPPPXFXLXGPPPP 434
P PPPP GPPPP
Sbjct: 147 PKLPPPPPIPPPGPPPP 163
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
GGGG GGGG GG G F G G GG
Sbjct: 98 GGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGG 139
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXG 312
G GG + G GG GG + G F G P G G G
Sbjct: 259 GEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMGG 299
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXG 312
G GG + G GG GG + G F G P G G G
Sbjct: 259 GEGGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMGG 299
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXK 348
GGGG GGG GG G FF K
Sbjct: 12 GGGGGGASGGAGGGAPGGGGGGIRGFFSK 40
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 384 PXXPPPPXFXLXGPPPP 434
P PPPP GPPPP
Sbjct: 182 PKPPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 384 PXXPPPPXFXLXGPPPP 434
P PPPP GPPPP
Sbjct: 182 PKPPPPPPIPPPGPPPP 198
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 23.8 bits (49), Expect(2) = 8.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 792 PPPPPPP 798
Score = 22.6 bits (46), Expect(2) = 8.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 393 PPPPXFXLXGPPPP 434
PPPP PPPP
Sbjct: 784 PPPPRASEPPPPPP 797
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGG 309
GGGG + GGGG GG G P + G GG
Sbjct: 65 GGGGNAYRRNGGGGGGGGRNIGGLPTSSGVAPPPMGGGCCGG 106
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXP 318
GGGG GGGG GG G + G G P
Sbjct: 109 GGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAP 147
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXG 369
GGGG+ GGGG GG G
Sbjct: 812 GGGGSNSNSGGGGGNGGGGNGG 833
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXG 369
GGGG+ GGGG GG G
Sbjct: 789 GGGGSNSNSGGGGGNGGGGNGG 810
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXG 369
GGGG+ GGGG GG G
Sbjct: 442 GGGGSNSNSGGGGGNGGGGNGG 463
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 370 PXWXPPXXPPPPXXCWXAPPP 432
P PP PPPP APPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 370 PXWXPPXXPPPPXXCWXAPPP 432
P PP PPPP APPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 313 PXGXPQTPXGXPXXKXXXXPXWXPPXXPPPPXXCWXAPPPP 435
P G P P G P P PP PP W PPP
Sbjct: 78 PPG-PSGPSGPPVYHNQGPPRGYPP-PPPQGADTWRGAPPP 116
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGGEXKR 297
G GG GG G GG Q G P ++G P G E ++
Sbjct: 531 GAGGRGGGAHGGAGRGGGYQGGRGGGRGFQNPRDLFGPPKGEEEQQ 576
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 434 GGGGAXQXKXGGGGXXGGXQXGXXXFFXKGXPXGVWGXPXGGEXKR 297
G GG GG G GG Q G P ++G P G E ++
Sbjct: 531 GAGGRGGGAHGGAGRGGGYQGGRGGGRGFQNPRDLFGPPKGEEEQQ 576
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 23.8 bits (49), Expect(2) = 9.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 552 PPPPPPP 572
PPPPPPP
Sbjct: 143 PPPPPPP 149
Score = 22.6 bits (46), Expect(2) = 9.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 393 PPPPXFXLXGPPPP 434
PPPP PPPP
Sbjct: 134 PPPPPSPPPPPPPP 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,070,733
Number of Sequences: 27780
Number of extensions: 180725
Number of successful extensions: 5039
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2403
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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