Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C15
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical ... 36 0.049
AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical ... 36 0.049
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 33 0.35
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 33 0.35
L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome asse... 30 1.8
Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 28 9.8
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 28 9.8
>AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.8 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.049
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Frame = +2
Query: 386 SILIFGIVETLPKDPTGTSADSVDNPVIKALPKLRAAFPDLLIACDV--CLCPYTSHGHC 559
S+LI PK G + D P I P A + LIAC++ + T + C
Sbjct: 8 SVLIILYFVLKPKSLKGFNPDGFIKPFISYAPSFFTAPDNKLIACEIRKSMSQLTLNMMC 67
Query: 560 GLLKSGGGIDHEASVKRIAEVALAYAKAGAHVVAPSDMMDNRIKAIKEELVRNKLQNQVS 739
L + + + E + + + V PSD + N A++ VR+ + VS
Sbjct: 68 LLYNETQYLQDKNNFTNTWETSTRKCTSETNFVTPSDSLKNDKDAVRFVFVRDPFRRFVS 127
Query: 740 ILSYSC 757
+ C
Sbjct: 128 MYLNKC 133
>AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.2 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.049
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Frame = +2
Query: 386 SILIFGIVETLPKDPTGTSADSVDNPVIKALPKLRAAFPDLLIACDV--CLCPYTSHGHC 559
S+LI PK G + D P I P A + LIAC++ + T + C
Sbjct: 8 SVLIILYFVLKPKSLKGFNPDGFIKPFISYAPSFFTAPDNKLIACEIRKSMSQLTLNMMC 67
Query: 560 GLLKSGGGIDHEASVKRIAEVALAYAKAGAHVVAPSDMMDNRIKAIKEELVRNKLQNQVS 739
L + + + E + + + V PSD + N A++ VR+ + VS
Sbjct: 68 LLYNETQYLQDKNNFTNTWETSTRKCTSETNFVTPSDSLKNDKDAVRFVFVRDPFRRFVS 127
Query: 740 ILSYSC 757
+ C
Sbjct: 128 MYLNKC 133
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 442 TSTCWVLRQCLHNPKNEYRFESFLHKFC*KGYELVNTISVYIRHTMNRFDSIIF 281
+++ W RQC H+PK+E + FLH Y V+ Y +H N F S +F
Sbjct: 1952 SNSSWFCRQCGHSPKSE--IDLFLH------YIQVHLKPAYDKHQSNSFKSNVF 1997
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 442 TSTCWVLRQCLHNPKNEYRFESFLHKFC*KGYELVNTISVYIRHTMNRFDSIIF 281
+++ W RQC H+PK+E + FLH Y V+ Y +H N F S +F
Sbjct: 1952 SNSSWFCRQCGHSPKSE--IDLFLH------YIQVHLKPAYDKHQSNSFKSNVF 1997
>L23645-8|AAK26133.1| 282|Caenorhabditis elegans Peroxisome
assembly factor protein19 protein.
Length = 282
Score = 30.3 bits (65), Expect = 1.8
Identities = 40/149 (26%), Positives = 58/149 (38%), Gaps = 6/149 (4%)
Frame = +2
Query: 203 AALRKLQEPNTSIEPHNIMYPVFLIEKDNAIEPVHSM-PNVNRYGVDQLIPLLAELVEKG 379
A L L+ PN+ +EP M L K+ P+ + N +Y D L AE E+
Sbjct: 128 AGLDMLRSPNSPMEPFMSMIMQTLASKEVMYPPLKEIFDNYPKYLEDNGAGLDAETKERY 187
Query: 380 LKSILIFG-IVETLPKDPTGTSADSVD---NPVIKALPKLRAAFPDL-LIACDVCLCPYT 544
K + G I K P VD P +A P F L + ++ Y
Sbjct: 188 EKQFEVLGKICTEFEKQPELAEVQPVDAATQPAPEADPASIEHFEKLGKLLVELQQYGYP 247
Query: 545 SHGHCGLLKSGGGIDHEASVKRIAEVALA 631
G L G ID E+ + ++A+ A A
Sbjct: 248 PKELVGALPDGWQID-ESGLPKVADAAAA 275
>Z81458-6|CAB03826.2| 328|Caenorhabditis elegans Hypothetical
protein F07B10.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 472 FYYWIVY*ICTSTCWVLRQCLHNPKNEYRFESFLH 368
FY W+V + +T W L P+ + E FLH
Sbjct: 133 FYAWVVLILSLATSWGLTAAFMFPQTDRTTEIFLH 167
>Z77656-6|CAB01142.2| 328|Caenorhabditis elegans Hypothetical
protein F07B10.3 protein.
Length = 328
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 472 FYYWIVY*ICTSTCWVLRQCLHNPKNEYRFESFLH 368
FY W+V + +T W L P+ + E FLH
Sbjct: 133 FYAWVVLILSLATSWGLTAAFMFPQTDRTTEIFLH 167
>AC006804-2|AAL32253.2| 372|Caenorhabditis elegans Hypothetical
protein Y53G8B.3 protein.
Length = 372
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -3
Query: 805 LFIVSRXRSVHRRCELTRVRQYRHLVLQFISDQLLFDCFNPIVHH 671
LF+V S+ RR L R+R+Y L QF+ LL V+H
Sbjct: 245 LFVVFATISMRRRGFLYRIRKYLKLYYQFLLPGLLLGMILYDVYH 289
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 647 HQLLHKPMRLQLSSLPMLHGRYLLHSSVSHNVRVMCKDINIHH 519
H+++ +PM L+ M G Y S H+VR+M ++ +++
Sbjct: 300 HKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 647 HQLLHKPMRLQLSSLPMLHGRYLLHSSVSHNVRVMCKDINIHH 519
H+++ +PM L+ M G Y S H+VR+M ++ +++
Sbjct: 300 HKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,007,659
Number of Sequences: 27780
Number of extensions: 410701
Number of successful extensions: 1013
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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