Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C13
         (867 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1; B...    60   9e-08
UniRef50_Q1HQR2 Cluster: Activating transcription factor; n=2; A...    39   0.19 
UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,...    36   1.0  
UniRef50_A4FPA8 Cluster: Putative uncharacterized protein; n=1; ...    36   1.8  
UniRef50_UPI0000D574DD Cluster: PREDICTED: similar to CG8669-PA,...    35   3.1  
UniRef50_Q0S066 Cluster: Possible transposase; n=1; Rhodococcus ...    33   7.1  
UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating...    33   9.4  

>UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1;
           Bombyx mori|Rep: Activating transcription factor -
           Bombyx mori (Silk moth)
          Length = 236

 Score = 59.7 bits (138), Expect = 9e-08
 Identities = 32/53 (60%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +3

Query: 702 QXTEELLREFETVYGAVELTHLTPXXSXRDPXI-XCF*VRSXAQCXXLXPPXP 857
           Q TEELLREFETVYGAVELTHLTP  S   P           AQC  L PP P
Sbjct: 29  QPTEELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQQAQCTALAPPAP 81


>UniRef50_Q1HQR2 Cluster: Activating transcription factor; n=2;
           Aedes aegypti|Rep: Activating transcription factor -
           Aedes aegypti (Yellowfever mosquito)
          Length = 405

 Score = 38.7 bits (86), Expect = 0.19
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = +3

Query: 702 QXTEELLREFETVYGAVELTHLTP 773
           Q TEELL EF+ VY  VELTHLTP
Sbjct: 132 QNTEELLMEFDYVYENVELTHLTP 155


>UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG8669-PA, isoform A - Apis mellifera
          Length = 357

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 18/32 (56%), Positives = 25/32 (78%)
 Frame = +1

Query: 532 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENI 627
           LL++LD   K+E  FS+WLEEK++LP IFE +
Sbjct: 64  LLEKLDEWIKEEP-FSDWLEEKIELP-IFEEL 93


>UniRef50_A4FPA8 Cluster: Putative uncharacterized protein; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep: Putative
           uncharacterized protein - Saccharopolyspora erythraea
           (strain NRRL 23338)
          Length = 55

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = +1

Query: 586 LEEKVDLPSIFENISEVPERVDPQPPGSGSSFKSFCDLGXPLK 714
           L EK  L S  E I+E P+RVDP  PG  + F    D   P K
Sbjct: 3   LIEKYTLASRQERIAETPDRVDPAKPGHAARFHGRFDSSEPPK 45


>UniRef50_UPI0000D574DD Cluster: PREDICTED: similar to CG8669-PA,
           isoform A isoform 1; n=2; Tribolium castaneum|Rep:
           PREDICTED: similar to CG8669-PA, isoform A isoform 1 -
           Tribolium castaneum
          Length = 318

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 696 PRQXTEELLREFETVYGAVELTH--LTPXXS 782
           P   T+ LL+EFE VY  VELTH  LTP  S
Sbjct: 111 PNTDTQFLLKEFENVYDVVELTHETLTPPQS 141


>UniRef50_Q0S066 Cluster: Possible transposase; n=1; Rhodococcus sp.
           RHA1|Rep: Possible transposase - Rhodococcus sp. (strain
           RHA1)
          Length = 103

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 750 QHHKPFRIPAAVLQWXAEVTKGLEARTAARGL 655
           +HH+P RI  A ++   +VTKG  +RTA + +
Sbjct: 16  EHHQPHRIDVATVRLRTKVTKGPRSRTAGKAM 47


>UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating
           transcription factor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to activating transcription factor -
           Nasonia vitripennis
          Length = 434

 Score = 33.1 bits (72), Expect = 9.4
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +1

Query: 541 QLDSQCKQENIFSNWLEEKVDLPSIFENI 627
           +L S  K+E+ F++WLEEK+DLP IFE +
Sbjct: 69  ELKSWIKEES-FADWLEEKIDLP-IFEEL 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,498,802
Number of Sequences: 1657284
Number of extensions: 11707441
Number of successful extensions: 28134
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28132
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)