Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C12
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0887 + 24018847-24019281                                         31   1.6  
03_05_0497 + 24932336-24932485,24934037-24934199,24934306-249344...    30   2.8  
08_02_0912 - 22536181-22537011                                         29   6.5  
08_01_0579 - 5141356-5141439,5141656-5141718,5142297-5142424,514...    28   8.6  

>12_02_0887 + 24018847-24019281
          Length = 144

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 25/70 (35%), Positives = 31/70 (44%)
 Frame = +1

Query: 391 RPTGSRAGRREYSRIREIPGDRIG*DILLRRPSAGLSVHRHLIPDRSEN*IRSNRFRWKR 570
           RP  + A  R  S  R  P  RI     + RP+   SV R + P  +   IR    RW R
Sbjct: 35  RPDAAHAIDRATSASRVAPVHRI-----VPRPN---SVSRQVRPSAANPGIRQRHARWAR 86

Query: 571 DSRVVSLPTP 600
           DS  V  P+P
Sbjct: 87  DSTPVKPPSP 96


>03_05_0497 +
           24932336-24932485,24934037-24934199,24934306-24934447,
           24934528-24934804,24934887-24935085,24935169-24935491
          Length = 417

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 797 AGTRCPGSQGSGILLVYQRPTPNSSRKREHTCRRVR 690
           A  RCPG QGSG+ +  ++  P+  ++ +  C   +
Sbjct: 159 ASMRCPGCQGSGMKITIRQLGPSMIQQMQQPCNECK 194


>08_02_0912 - 22536181-22537011
          Length = 276

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +2

Query: 164 EDAA--TTPKP--KKVLETVMNPAYIPAEEKHG 250
           EDA   TTP P  KKV E ++N  + P +  HG
Sbjct: 156 EDAVFQTTPPPSHKKVAERILNRRFFPPDPSHG 188


>08_01_0579 -
           5141356-5141439,5141656-5141718,5142297-5142424,
           5142554-5142794,5142872-5142999,5143105-5143135
          Length = 224

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 83  RQRPAIPAIMW-PTVLIALQIVTHVICHEDAATTPKPKKVLETVMNPAYIPAEEKHGSY 256
           +QRP IP ++W P   I  ++V +V    D  T  K K++  T +N + +    ++G Y
Sbjct: 84  KQRPQIPLMLWKPLAPIYPRLVQNV---ADGLTFEKTKELRNTGLNSSPLMKLTRNGVY 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,632,951
Number of Sequences: 37544
Number of extensions: 674051
Number of successful extensions: 1560
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)