Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C12
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical pr...    30   2.5  
U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein ...    30   2.5  

>Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical
           protein F35G12.6 protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 582 DPRVTFPSKPITPYLVFTPVRYEVAVHAESGTW 484
           D  + FP  P+T Y++ T V YE   H     W
Sbjct: 264 DAHMDFPGTPVTNYILKTLVLYECEKHCSEYEW 296


>U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein
           protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 582 DPRVTFPSKPITPYLVFTPVRYEVAVHAESGTW 484
           D  + FP  P+T Y++ T V YE   H     W
Sbjct: 264 DAHMDFPGTPVTNYILKTLVLYECEKHCSEYEW 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,733,917
Number of Sequences: 27780
Number of extensions: 505915
Number of successful extensions: 1225
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)