Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP09_F_C08
(874 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 188 1e-46
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 178 1e-43
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 154 2e-36
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 138 2e-31
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 126 6e-28
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 119 1e-25
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 117 3e-25
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 112 1e-23
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 108 2e-22
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 102 1e-20
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 101 2e-20
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 98 2e-19
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 91 3e-17
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 88 3e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 84 5e-15
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 79 1e-13
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 66 8e-10
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 60 5e-08
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 60 7e-08
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 59 1e-07
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 59 1e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 58 3e-07
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 56 2e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 55 3e-06
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 54 5e-06
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 53 1e-05
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 51 3e-05
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 49 2e-04
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 48 3e-04
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 44 0.004
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 42 0.015
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.027
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 42 0.027
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 40 0.062
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 40 0.083
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 38 0.44
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 37 0.77
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 34 5.4
UniRef50_Q8GGT4 Cluster: Subtilisin-like secreted protease; n=1;... 33 9.5
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 9.5
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 33 9.5
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 188 bits (459), Expect = 1e-46
Identities = 95/164 (57%), Positives = 115/164 (70%), Gaps = 5/164 (3%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++
Sbjct: 106 MALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIK 165
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IR KM II R++T+++L+ VV KL+PDSIAKDI KAC +YPL DV IRKVKVL +PR
Sbjct: 166 NIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPR 225
Query: 757 XXIS-----XXDGTSXRXRWXQGGXPXTXLNGRXATXPPVQXXV 873
+S DG G ++ PPVQ V
Sbjct: 226 FDLSSLMELHGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
Score = 87.0 bits (206), Expect = 5e-16
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHG
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHG 105
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2
Query: 140 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 280
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 178 bits (434), Expect = 1e-43
Identities = 83/127 (65%), Positives = 100/127 (78%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C MDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT Y
Sbjct: 96 CLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSY 155
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
AQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI KAC IYPL DV +RKV
Sbjct: 156 AQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKV 215
Query: 736 KVLXRPR 756
K+L +P+
Sbjct: 216 KMLKKPK 222
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +3
Query: 222 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHG 102
Score = 64.1 bits (149), Expect = 4e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 140 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 280
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 154 bits (374), Expect = 2e-36
Identities = 71/120 (59%), Positives = 92/120 (76%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
MD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R
Sbjct: 498 MDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIR 557
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IR+KM EI+T T+ +L+E+V K IP+SI ++I KA IYPL++V IRKVK+L P+
Sbjct: 558 QIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPK 617
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF G
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWG 497
Score = 58.0 bits (134), Expect = 3e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 146 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 247
DPF +KDWYD+KAPS+F R VG TLV+RTQG +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 138 bits (334), Expect = 2e-31
Identities = 65/127 (51%), Positives = 91/127 (71%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C +D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT Y
Sbjct: 96 CLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTY 155
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
A +Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++I KA GIYPL++V IRKV
Sbjct: 156 AASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKV 215
Query: 736 KVLXRPR 756
K+L +P+
Sbjct: 216 KLLKQPK 222
Score = 61.3 bits (142), Expect = 3e-08
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +3
Query: 246 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHG 102
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 146 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 280
DPF RKDWY +KAP+ F+ R VG TLVNR+ G +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 126 bits (305), Expect = 6e-28
Identities = 61/127 (48%), Positives = 81/127 (63%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C MDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I FT K Q+ Y
Sbjct: 22 CLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHAY 80
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
AQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RKV
Sbjct: 81 AQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKV 140
Query: 736 KVLXRPR 756
KVL +P+
Sbjct: 141 KVLKKPK 147
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 330 FRKFRLIAEYVQGRNVLCNFHG 395
FRKF+L E VQGR+ L NFHG
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHG 28
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 119 bits (286), Expect = 1e-25
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHT 567
+D+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +
Sbjct: 106 LDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSS 165
Query: 568 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLX 747
QVRAIR+K+ IT + + E LI + K I K I+PL+++ IRKVKVL
Sbjct: 166 QVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLK 225
Query: 748 RPR 756
RP+
Sbjct: 226 RPK 228
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 286
+DP +RK+WYD +AP FS + G TLV ++ GN I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +3
Query: 222 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYG 105
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 117 bits (282), Expect = 3e-25
Identities = 52/127 (40%), Positives = 85/127 (66%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C + +D T DK+ M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT Y
Sbjct: 95 CRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTY 154
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
AQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKV
Sbjct: 155 AQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKV 214
Query: 736 KVLXRPR 756
K++ RP+
Sbjct: 215 KLVKRPK 221
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYG 101
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 274
+DP RK+W+++ AP F+ G T +N++ G I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 112 bits (270), Expect = 1e-23
Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 14/134 (10%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
MDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+
Sbjct: 102 MDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVK 161
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAKDIXKACHGIYPLR 714
AIRKKM +I+T V++++L+ VV+ LI ++A+ I I+P+
Sbjct: 162 AIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIH 221
Query: 715 DVCIRKVKVLXRPR 756
+V IRKVKVL P+
Sbjct: 222 NVFIRKVKVLKTPK 235
Score = 64.9 bits (151), Expect = 3e-09
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+G
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYG 101
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGNENCFGRIEGKSF 280
VDPFTRK+WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 108 bits (260), Expect = 2e-22
Identities = 58/124 (46%), Positives = 82/124 (66%), Gaps = 1/124 (0%)
Frame = +1
Query: 388 STXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQH 564
S MDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+
Sbjct: 85 SYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQY 143
Query: 565 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVL 744
QV I +I+ D ++L+EV+NKL+PD++ KD+ KAC IYPL DV +RKVK+L
Sbjct: 144 QQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKIL 201
Query: 745 XRPR 756
+P+
Sbjct: 202 QKPK 205
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
TK+ S GL G VFE SLA LQ D + RKF+LI E ++G+N L N +G
Sbjct: 40 TKMVSVGLNGLVFEASLASLQND---KVVVRKFKLITEDMRGKNGLTNSYG 87
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 102 bits (245), Expect = 1e-20
Identities = 46/123 (37%), Positives = 77/123 (62%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C M+LT+DK + M+KKW TLIEA D+ DG V RVF +G T + +KTCY
Sbjct: 48 CVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCY 107
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
+H+ + IRK M ++I +++ ++++++ KL +++ K I + I+PL++ C+RKV
Sbjct: 108 VKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKV 167
Query: 736 KVL 744
K +
Sbjct: 168 KTI 170
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 101 bits (242), Expect = 2e-20
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = +1
Query: 361 CKDVM---CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS 531
C+DV C + LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S
Sbjct: 90 CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKS 149
Query: 532 LSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 681
+KT YA+ Q++ IRK M +IT++ + EL + V+ L + K +
Sbjct: 150 NQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 140 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 274
I +PF++K+WY+VK P F +R VG +VN+T G +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
Score = 41.5 bits (93), Expect = 0.027
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHG 104
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 98.3 bits (234), Expect = 2e-19
Identities = 41/120 (34%), Positives = 79/120 (65%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M++TTDK+ +++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+
Sbjct: 106 MEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVK 165
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
+R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V+ P+
Sbjct: 166 WLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPK 225
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +3
Query: 243 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFH 392
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFH 104
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 146 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 286
+ RK+WYDV AP+ F KRQ T+ N+TQG + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/123 (34%), Positives = 73/123 (59%)
Frame = +1
Query: 376 CSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCY 555
C + LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y
Sbjct: 92 CFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVY 151
Query: 556 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKV 735
+Q RA+R+++ +II ++ N ++++ ++++ I + I C I+P+ V IRK+
Sbjct: 152 INSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKI 211
Query: 736 KVL 744
KV+
Sbjct: 212 KVV 214
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 87.8 bits (208), Expect = 3e-16
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +1
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+ KAC IYPL DV +RKVK+L +P+
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPK 169
Score = 62.9 bits (146), Expect = 1e-08
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = +3
Query: 222 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHG 99
Score = 59.3 bits (137), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 140 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 247
+VDPF++KDWYDV AP+MF+ R +G TLV RTQG +
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 83.8 bits (198), Expect = 5e-15
Identities = 41/119 (34%), Positives = 69/119 (57%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R
Sbjct: 99 MRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKAR 158
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
+R M + +T + + ++ + + I +I + C I + V I KVKV+ P
Sbjct: 159 QVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYITKVKVIKAP 217
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/133 (32%), Positives = 69/133 (51%)
Frame = +1
Query: 358 MCKDVMCSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLS 537
+ D C MD+T K + +K I+ +D+ TTDGY+LRVF I FT++
Sbjct: 90 LVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQ 149
Query: 538 QRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRD 717
+RK C+ + +R +R + E + ++ + +V KL + + +A I RD
Sbjct: 150 RRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRD 209
Query: 718 VCIRKVKVLXRPR 756
V IR+VKV+ RPR
Sbjct: 210 VMIRRVKVVKRPR 222
Score = 39.9 bits (89), Expect = 0.083
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 146 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQG 241
DP+ +K+WY V AP+ F R +G T V +T G
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
Score = 34.7 bits (76), Expect = 3.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 246 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 395
++A++ + RV+EV+L DL + KF L + V L NFHG
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHG 102
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 66.5 bits (155), Expect = 8e-10
Identities = 41/118 (34%), Positives = 68/118 (57%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q++A
Sbjct: 86 ELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQA 136
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IR+ M +I+ + + ++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 137 IREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +3
Query: 222 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGHG 401
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF G
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 280
VD ++KDWYD+KAP+MF+ R +G TLV RTQG + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 60.5 bits (140), Expect = 5e-08
Identities = 38/118 (32%), Positives = 64/118 (54%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+LT D +R +VK+ + I+AN+ V T DG+ +RV I T K A+ +Q+ +
Sbjct: 85 ELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIES 135
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IR+ M ++ + E +N+++ +A +I K IYPLR V I K +++ RP
Sbjct: 136 IRQIMINVVNKRGAELGFTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRP 193
Score = 33.9 bits (74), Expect = 5.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 143 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 229
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = +1
Query: 646 NKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
NKLIPDSI KDI KAC IYPL DV +RKVK+L +P+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPK 37
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 59.3 bits (137), Expect = 1e-07
Identities = 39/122 (31%), Positives = 63/122 (51%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S KT
Sbjct: 90 DMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------E 140
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPRX 759
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 141 IRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEE 200
Query: 760 XI 765
I
Sbjct: 201 KI 202
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Frame = +1
Query: 403 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 582
L D +R +V++ + I+ IDV T DGY +RV + FT T A+ +Q RAI
Sbjct: 80 LMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAI 130
Query: 583 RKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIXKACHGIYPLRDVCIRKVKVLXR 750
RK+M ++I + + E + + + +SI + I +A IYP+R IRK +VL
Sbjct: 131 RKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEE 190
Query: 751 P 753
P
Sbjct: 191 P 191
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/119 (29%), Positives = 63/119 (52%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
++LT D +R +V+K + + A +VKT DG V+R+ +G T + +K+
Sbjct: 94 LELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKS--------- 144
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVL P
Sbjct: 145 AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 55.6 bits (128), Expect = 2e-06
Identities = 33/116 (28%), Positives = 66/116 (56%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M++T D +R +V++ + ++A +DV+T DG +RV + T +S+ KT +Q +
Sbjct: 83 MEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKK 133
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVL 744
AIR+ M +II+ + + + + + ++A ++ IYP++ V + K+KVL
Sbjct: 134 AIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL 189
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 54.8 bits (126), Expect = 3e-06
Identities = 37/118 (31%), Positives = 62/118 (52%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+LT + L + ++ + IE +DV T DGY LRV + FT + + KT +Q RA
Sbjct: 89 ELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRA 139
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IR M +I+ ++ + + + + + +I K IYP+R V IRK+++L P
Sbjct: 140 IRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 54.0 bits (124), Expect = 5e-06
Identities = 33/118 (27%), Positives = 60/118 (50%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+LT D LR +V++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IR+ M +++ + ++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 134 IRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 52.8 bits (121), Expect = 1e-05
Identities = 36/118 (30%), Positives = 60/118 (50%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IR+ M + + + V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 134 IRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 51.2 bits (117), Expect = 3e-05
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
+L D +R + ++ + + +V T DGY LRV + FT R+ C + +Q A
Sbjct: 83 ELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSA 133
Query: 580 IRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIXKACHGIYPLRDVCIRKVKVLX 747
IRK M EI+ + S L E++ ++ S+A I ++ IYPLR V I K K+L
Sbjct: 134 IRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLLW 193
Query: 748 RP 753
P
Sbjct: 194 VP 195
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 48.8 bits (111), Expect = 2e-04
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT-QVR 576
+L+ D +R +V++ + I +D+ T DG+ LRV + T Y H Q
Sbjct: 91 ELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT----------AYRVHREQAT 140
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRP 753
IRK M +++ + E V ++I ++A +I I PLR I K KVL P
Sbjct: 141 TIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAP 199
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 48.0 bits (109), Expect = 3e-04
Identities = 37/120 (30%), Positives = 54/120 (45%)
Frame = +1
Query: 397 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 576
M+LT D +R +V++ + + DV T DG LR+ + T T T
Sbjct: 90 MELTRDYVRNLVRRGSSKVMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKH 140
Query: 577 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVLXRPR 756
IRK + + + + S+ +V I I D+ IYPLR V I K+KVL PR
Sbjct: 141 LIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 44.4 bits (100), Expect = 0.004
Identities = 34/130 (26%), Positives = 57/130 (43%)
Frame = +1
Query: 361 CKDVMCSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 540
C C+ ++ D +R MV++ + I+ + KT DGY L V I + L+
Sbjct: 73 CTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VIKIVLVSDSKLTA 131
Query: 541 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDV 720
K +R K+ I + L E+ +I D++ DI +YP++ +
Sbjct: 132 NKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKI 183
Query: 721 CIRKVKVLXR 750
IRK +VL R
Sbjct: 184 EIRKSEVLGR 193
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 42.3 bits (95), Expect = 0.015
Identities = 32/128 (25%), Positives = 57/128 (44%)
Frame = +1
Query: 361 CKDVMCSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 540
C+ C + D +R +V++ + I+ DVKT+D ++ V + T+ +
Sbjct: 74 CEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNT 133
Query: 541 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDV 720
+K IRK + + I + E V LI D I D+ A IYPL+ +
Sbjct: 134 KKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKI 184
Query: 721 CIRKVKVL 744
+RK +++
Sbjct: 185 EVRKSELV 192
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.027
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 140 IVDPFTRKDWYDVKAPSMFSKRQVGTT 220
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 41.5 bits (93), Expect = 0.027
Identities = 31/130 (23%), Positives = 62/130 (47%)
Frame = +1
Query: 355 NMCKDVMCSATSTXMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL 534
N+ DV + T TTD +R M+++ + I+A+ VKT D +++ + T +
Sbjct: 73 NVAGDV-ANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRR-- 129
Query: 535 SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLR 714
A+ +Q + +R+ + +++ E++ ++ +A ++ IYPL+
Sbjct: 130 -------AKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYPLK 182
Query: 715 DVCIRKVKVL 744
V I K KVL
Sbjct: 183 RVEIIKSKVL 192
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 40.3 bits (90), Expect = 0.062
Identities = 29/112 (25%), Positives = 55/112 (49%)
Frame = +1
Query: 409 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK 588
T+ +R +++++ I+ IDV T DGY++R+ + T K Q + ++IR
Sbjct: 100 TNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRA 150
Query: 589 KMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKVL 744
K +++ V + + ++ S+ +I IYP R V IRK ++L
Sbjct: 151 KTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLL 202
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 39.9 bits (89), Expect = 0.083
Identities = 31/114 (27%), Positives = 53/114 (46%)
Frame = +1
Query: 400 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 579
++T D LR +VK+ + I+ ++ V T D +R+ ++S A Q A
Sbjct: 87 EVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHA 137
Query: 580 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRKVKV 741
+R + + +L +VN ++ I+KD+ K +YP R V I K KV
Sbjct: 138 LRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 37.5 bits (83), Expect = 0.44
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 379 SATSTXM--DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTC 552
SATS + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 77 SATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK-- 134
Query: 553 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIXKACHGIYPLRDVCIRK 732
A+R + ++I V + + V I DI + +R + + K
Sbjct: 135 -------HALRLIIRDVIENTVPQMNIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEK 187
Query: 733 VKVL 744
VK++
Sbjct: 188 VKLV 191
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 36.7 bits (81), Expect = 0.77
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -1
Query: 232 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQ 74
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H +
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 33.9 bits (74), Expect = 5.4
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = -3
Query: 782 VPSXXEXSXRGLFNTFTFRMQTSRRG*MPWQAXSMSLAMESGINLFTTSLSSELVTSRVM 603
+P+ GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2007 LPTNSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARAR 2065
Query: 602 ISHIFFLIALT*VCWA*HVLRWLKES 525
F +A+ + +++WL S
Sbjct: 2066 KQPFFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q8GGT4 Cluster: Subtilisin-like secreted protease; n=1;
Streptomyces atroolivaceus|Rep: Subtilisin-like secreted
protease - Streptomyces atroolivaceus
Length = 1237
Score = 33.1 bits (72), Expect = 9.5
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 246 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGHGPH 407
K+ +EG G+ +V++ D ADT+ + A +V G + + +++GHG H
Sbjct: 230 KVWAEGDTGQDVKVAMLDSGADTEHPDLVGQVSDSASFVPGEDDIADYNGHGTH 283
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 9.5
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 618 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 511
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 33.1 bits (72), Expect = 9.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 392 RXWTSQPISSGGWLKNGRL--SSKPTLM*RQPMDTFYVSSALVSPI 523
R WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1645 RVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,657,693
Number of Sequences: 1657284
Number of extensions: 15561087
Number of successful extensions: 38629
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 37265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38599
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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