Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP09_F_C08
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   7.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.6  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 425 GWLKNGRLSS 454
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 535 SRSPYW*NQCRRHVERIHRLSSHQC 461
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 739 LSPFGCKHRAEGRCHGRPXRCP 674
           L P+    R   RCHG    CP
Sbjct: 336 LWPYTMYFRMPHRCHGNLQSCP 357


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 306 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 214
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 136 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 167


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 306 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 214
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 400


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 306 LVDQPG-KLRKLFPSILPKQFSXPWVRLTSVV 214
           LV +P  +LRK F  +L K     W+ L + V
Sbjct: 369 LVTRPSYRLRKFFDELLFKCMKEKWIPLCNSV 400


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 441 PFFNHPPELIGCEVHXRGSC 382
           PF  HP  L+G E   +G C
Sbjct: 126 PFRPHPHNLVGREGCKKGVC 145


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 437 FLTIHLSLSVVRSMXVEVAEHITSLHIFGD 348
           F  + L L  +RS+ ++  EH+    + GD
Sbjct: 361 FAKLLLRLPALRSIGLKCLEHLFFFKLIGD 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,569
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)